FC925427

Overview
NameFC925427
Unique NameFC925427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_DINSH (Bifunctional purine biosynthesis protein purH OS=Dinoroseobacter shibae (strain DFL 12) GN=purH PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.424e-49
Identity = 102/190 (53.68%), Postives = 128/190 (67.37%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQ--DDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            ++AL+S+SDK  L  LG  L   G  ++STGGTA +L   G+ V  V  +T FPEM+DGRVKTLHP +HGG+LA RD   H+ A+  HGIG  DL+VVNLYPF  + T A G D+   IENIDIGGPAMIRAAAKNH  V V+ D EDY ALL  L+  +      FR+K+A  A+   A+YD+AVS W+
Sbjct:    8 RRALLSVSDKTGLVPLGQALAARGVELLSTGGTAKALREAGLDVVDVSDVTGFPEMMDGRVKTLHPKVHGGLLALRDNAAHVSAMERHGIGAIDLLVVNLYPF--EATVAAGADYAACIENIDIGGPAMIRAAAKNHSFVTVLTDVEDYEALLGELEAREGATGYPFRQKMALNAYARTAAYDAAVSGWM 195          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRSY (Bifunctional purine biosynthesis protein purH OS=Streptococcus suis (strain 05ZYH33) GN=purH PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.696e-49
Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWK 681
            K+ALIS+SDK  +      L +LG+ I+STGGT  +L+N GV+   ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  +H IG  DLVVVNLYPF + +     + ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DYP +L E  +  Q     R++LA K F+H A+YD+ ++++  K
Sbjct:    3 KRALISVSDKNGIVEFAQELTKLGWEIISTGGTKVALDNAGVATIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDVDSHLQAAKDHEIGLIDLVVVNLYPFKETILRP-DVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYPTVLGEIAEQGQTTYPTRQRLAAKVFRHTAAYDALIADYFTK 192          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRS2 (Bifunctional purine biosynthesis protein purH OS=Streptococcus suis (strain 98HAH33) GN=purH PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.696e-49
Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWK 681
            K+ALIS+SDK  +      L +LG+ I+STGGT  +L+N GV+   ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  +H IG  DLVVVNLYPF + +     + ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DYP +L E  +  Q     R++LA K F+H A+YD+ ++++  K
Sbjct:    3 KRALISVSDKNGIVEFAQELTKLGWEIISTGGTKVALDNAGVATIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDVDSHLQAAKDHEIGLIDLVVVNLYPFKETILRP-DVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYPTVLGEIAEQGQTTYPTRQRLAAKVFRHTAAYDALIADYFTK 192          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_SINMW (Bifunctional purine biosynthesis protein purH OS=Sinorhizobium medicae (strain WSM419) GN=purH PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.696e-49
Identity = 99/187 (52.94%), Postives = 128/187 (68.45%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K AL+S+SDK  +  L   L + G  +VSTGGT  +L + G+ V+ V +LT FPE++DGRVKTLHP +HGG+LA RD   H  A+S HGI   DL V+NLYPF ++V + GG D+   +ENIDIGGPAMIRA+AKNH  V VV D  DYP LLE + G      FR+K+A KA+   A+YD+A+S W
Sbjct:   17 KTALLSVSDKSGIVELARHLNDRGVRLVSTGGTHKALADAGLPVSDVSELTGFPEIMDGRVKTLHPGVHGGLLAIRDDAEHAGAMSAHGITAIDLAVINLYPF-EEVRAKGG-DYPTTVENIDIGGPAMIRASAKNHAYVTVVTDPADYPLLLEEIAGGTTRYAFRQKMAAKAYARTAAYDAAISNW 201          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_LISMF (Bifunctional purine biosynthesis protein purH OS=Listeria monocytogenes serotype 4b (strain F2365) GN=purH PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.266e-48
Identity = 100/189 (52.91%), Postives = 133/189 (70.37%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+ALIS+SDK  +      L ELG  I+STGGT  + E  GV VT +E++T FPEMLDGRVKTLHP IHGG+LARRD   HM+A++ H I   DLVVVNLYPF + +  + G+  E+ IENIDIGGP+M+R+AAKN+  V VVVD+ DY  +L E  +      + R++LA K F+H A+YD+ ++E+L
Sbjct:    2 KRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEEVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKS-GVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTADYDTVLTELEEHGATTFETRQRLAAKVFRHTAAYDALIAEYL 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_OCEIH (Bifunctional purine biosynthesis protein purH OS=Oceanobacillus iheyensis GN=purH PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48
Identity = 95/188 (50.53%), Postives = 130/188 (69.15%), Query Frame = 1
Query:  109 NKQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            +K+ALIS+SDK ++     GL+E G+ I+STGGT  S+   G+ VT V+++T FPEMLDGRVKTLHP IHGG+L +R    H+  + EHGI + DLV VNLYPF + V     +  +D IENIDIGGP+M+R+AAKN +DVLVV    DY  +L  +    D  +FR++LA K F+H ASYD+ ++ +
Sbjct:    2 SKRALISVSDKTNIIEFAKGLKESGFEILSTGGTLRSIAEAGIDVTPVDEVTGFPEMLDGRVKTLHPMIHGGLLGKRSNHEHLSQMEEHGIRSIDLVAVNLYPFKETVQKP-DVSHQDIIENIDIGGPSMLRSAAKNFEDVLVVTGPTDYNRVLAAITSETDTYEFRQQLAAKVFRHTASYDAMIANY 188          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_LISMH (Bifunctional purine biosynthesis protein purH OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=purH PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48
Identity = 100/189 (52.91%), Postives = 133/189 (70.37%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+ALIS+SDK  +      L ELG  I+STGGT  + E  GV VT +E++T FPEMLDGRVKTLHP IHGG+LARRD   HM+A++ H I   DLVVVNLYPF + +  + G+  E+ IENIDIGGP+M+R+AAKN+  V VVVD+ DY  +L E  +      + R++LA K F+H A+YD+ ++E+L
Sbjct:    2 KRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEEVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKS-GVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTVDYDTVLTELEEHGATTFETRQRLAAKVFRHTAAYDALIAEYL 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_CUPTR (Bifunctional purine biosynthesis protein purH OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=purH PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48
Identity = 104/192 (54.17%), Postives = 127/192 (66.15%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD----DQQFRRKLAWKAFQHVASYDSAVSEWL 675
            KQAL+S+SDK  +      L  LG T++STGGTA  L + G+ VT+V   T FPEMLDGRVKTLHP +HGGILARRD   HM AL+EH I T DL+VVNLYPF   V +       D IENIDIGGP M+R+AAKNH+DV V+VD  DY  +L  ++ N +    D  FR  LA K F H A YD A++ +L
Sbjct:    3 KQALLSVSDKTGIVEFARELNALGVTLLSTGGTAKLLADSGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMAALAEHDIPTIDLLVVNLYPFQQTV-AKDDCTLPDAIENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLGEMRANGNSVGYDTNFR--LATKVFAHTAQYDGAITNYL 191          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_LISMC (Bifunctional purine biosynthesis protein purH OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=purH PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.160e-48
Identity = 100/189 (52.91%), Postives = 132/189 (69.84%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+ALIS+SDK  +      L ELG  I+STGGT  + E  GV VT +E +T FPEMLDGRVKTLHP IHGG+LARRD   HM+A++ H I   DLVVVNLYPF + +  + G+  E+ IENIDIGGP+M+R+AAKN+  V VVVD+ DY  +L E  +      + R++LA K F+H A+YD+ ++E+L
Sbjct:    2 KRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEDVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKS-GVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTADYDTVLTELEEHGATTFETRQRLAAKVFRHTAAYDALIAEYL 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_CAMC1 (Bifunctional purine biosynthesis protein purH OS=Campylobacter concisus (strain 13826) GN=purH PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.160e-48
Identity = 98/187 (52.41%), Postives = 128/187 (68.45%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            +AL+S+SDK+ +     GL+EL + I+STGGT   L+ +GV  T+V + T  PEM +GRVKTLHP +HGGIL +RD   H+    EHGI   DLV VNLYPF  K T+    DF + IENIDIGGPAM+R+AAKN KDVL+V    DY  +L+ LK   DD +FRR L  KAF+H A+YDS ++ ++
Sbjct:    2 RALLSVSDKEGIVEFAKGLEELDWQILSTGGTYKLLKAEGVKATEVSEFTASPEMFEGRVKTLHPKVHGGILHKRDDATHVAQAKEHGIEGIDLVCVNLYPF--KETTIRTDDFAEIIENIDIGGPAMVRSAAKNFKDVLIVTSVLDYDEILKRLKEKSDDYEFRRSLMIKAFEHTAAYDSMIANYM 186          
The following BLAST results are available for this feature:
BLAST of FC925427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_DINSH7.424e-4953.68Bifunctional purine biosynthesis protein purH OS=D... [more]
PUR9_STRSY9.696e-4950.26Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRS29.696e-4950.26Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_SINMW9.696e-4952.94Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_LISMF1.266e-4852.91Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_OCEIH1.654e-4850.53Bifunctional purine biosynthesis protein purH OS=O... [more]
PUR9_LISMH1.654e-4852.91Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_CUPTR1.654e-4854.17Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_LISMC2.160e-4852.91Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_CAMC12.160e-4852.41Bifunctional purine biosynthesis protein purH OS=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 TF Citrus clementina cDNA clone KN0AAP11YE08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925427 ID=FC925427; Name=FC925427; organism=Citrus clementina; type=EST; length=681bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAA
back to top