FC925427

Overview
NameFC925427
Unique NameFC925427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRTD (Bifunctional purine biosynthesis protein purH OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=purH PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 94/188 (50.00%), Postives = 131/188 (69.68%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ALIS+SDK  +      L++LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  ++ I   DLVVVNLYPF + +     + + D +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L+ L  N +   + R++LA K ++H ASYD+ ++E+
Sbjct:    3 KRALISVSDKAGIVEFAQELKKLGWDIISTGGTKVTLDNAGVDTIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDLHSHLQAAKDNNIELIDLVVVNLYPFKETILKP-DVTYADAVENIDIGGPSMLRSAAKNHASVTVVVDPADYAVVLDELSANGETTYETRQRLAAKVYRHTASYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRR6 (Bifunctional purine biosynthesis protein purH OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=purH PE=3 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ LIS+SDK  +      L++LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H++A +E+ I   DLVVVNLYPF + +     + + D +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L+ L  N +   + R++LA K F+H A+YD+ ++E+
Sbjct:    3 KRVLISVSDKAGIVEFAQELKKLGWEIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDLDSHLEAANENQIELIDLVVVNLYPFKETILKP-DVTYADAVENIDIGGPSMLRSAAKNHASVTVVVDPADYTVVLDELSANGETTYETRQRLAAKVFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRP2 (Bifunctional purine biosynthesis protein purH OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=purH PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ LIS+SDK  +      L++LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H++A +E+ I   DLVVVNLYPF + +     + + D +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L+ L  N +   + R++LA K F+H A+YD+ ++E+
Sbjct:    3 KRVLISVSDKAGIVEFAQELKKLGWEIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDLDSHLEAANENQIELIDLVVVNLYPFKETILKP-DVTYADAVENIDIGGPSMLRSAAKNHASVTVVVDPADYTVVLDELSANGETTYETRQRLAAKVFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_PARDP (Bifunctional purine biosynthesis protein purH OS=Paracoccus denitrificans (strain Pd 1222) GN=purH PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 105/190 (55.26%), Postives = 126/190 (66.32%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD--DQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+ALIS+SDK  L      L   G  I+STGGTA +L   G+SV  V  +T FPEM+DGRVKTLHP +HGG+LA RD   HM A   H IG  DL+VVNLYPF  + T A G  ++D IENIDIGGPAMIRAAAKNH  V VVVD +DY A+L  L  N D     FR++ A  A+   A+YD+AVS W+
Sbjct:    8 KRALISVSDKTGLVDFARALSARGVEILSTGGTAKTLREAGLSVVDVADVTGFPEMMDGRVKTLHPVVHGGLLALRDNDEHMAAAKSHRIGMIDLLVVNLYPF--EATVAKGAAYDDCIENIDIGGPAMIRAAAKNHAFVTVVVDVQDYAAVLAELDANDDRTGLAFRQRQAQIAYARTAAYDAAVSTWM 195          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_BURM1 (Bifunctional purine biosynthesis protein purH OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=purH PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.285e-48
Identity = 100/190 (52.63%), Postives = 125/190 (65.79%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRR--KLAWKAFQHVASYDSAVSEWL 675
            KQALIS+SDK  +      L +LG  ++STGGTA  L + G+ VT+V   T FPEMLDGRVKTLHP +HGGILARRD   HM AL  H I T DL+VVNLYPF   + +       D IENIDIGGP M+R+AAKNH+DV V+VD  DY  +L+ +K N +   +    +LA K F H A YD A++ +L
Sbjct:    3 KQALISVSDKTGIVDFAKSLSDLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMQALEAHDIPTIDLLVVNLYPFVATI-AKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVIVDPADYAVVLDEMKANGNTVGYATNFRLATKVFAHTAQYDGAITNYL 191          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_RHOS5 (Bifunctional purine biosynthesis protein purH OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=purH PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.208e-48
Identity = 101/189 (53.44%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQ--DDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            +AL+S+SDK  L  L   L EL   ++STGGTA +L   G+ V  V ++T FPEM+DGRVKTLHP +HGG+LA RD   H+ A++ HGI   DL+VVNLYPF  +   A G  ++D IENIDIGGPAMIRAAAKNH+ V VV D+ DY ALL+ L+ +       FR+KLA  A+   A+YD+AVS W+
Sbjct:    9 RALLSVSDKSGLLDLARALAELEVELISTGGTAATLRAAGLKVRDVAEVTGFPEMMDGRVKTLHPMVHGGLLALRDDDEHLVAMAAHGIEPIDLLVVNLYPF--EAAVARGASYDDCIENIDIGGPAMIRAAAKNHRFVNVVTDTADYKALLDELRAHDGATTLAFRQKLALTAYSRTAAYDAAVSAWM 195          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_PEDPA (Bifunctional purine biosynthesis protein purH OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=purH PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.208e-48
Identity = 98/188 (52.13%), Postives = 125/188 (66.49%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K AL+S+SDK  +     GL +  + I+STGGT   LE  G+S+  VE +T FPEMLDGRVKTLHP IHGG+LARRD   H+ AL EH I   DLV VNLYPF   +    G+   + IE IDIGGP+M+R+AAKN   VL VVD +DY  +L  L    D+ +FRR LA K FQH A+YD+ ++++L
Sbjct:    2 KTALLSVSDKTGIVEFARGLVKADFRIISTGGTKKVLEEAGLSIVSVEAITNFPEMLDGRVKTLHPAIHGGLLARRDLPEHLAALKEHNIDLIDLVCVNLYPFKSTIMQ-NGVTEAEAIEQIDIGGPSMLRSAAKNFASVLPVVDPKDYQPVLAALAHQTDNVKFRRALALKVFQHTAAYDTLIAQYL 188          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRP7 (Bifunctional purine biosynthesis protein purH OS=Streptococcus pneumoniae (strain 70585) GN=purH PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.072e-47
Identity = 93/188 (49.47%), Postives = 132/188 (70.21%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGN-QDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ LIS+SDK  +      L++LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H++A+ ++ I   DLVVVNLYPF + +     + + D +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L+ L  N +   + R++LA K F+H A+YD+ ++E+
Sbjct:    3 KRVLISVSDKAGIVEFAQELKKLGWEIISTGGTKVALDNAGVDTIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDLDSHLEAVKDNKIELIDLVVVNLYPFKETILKP-DVTYADAVENIDIGGPSMLRSAAKNHASVTVVVDPADYAVVLDELAANGETSYETRQRLAAKVFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_PROMT (Bifunctional purine biosynthesis protein purH OS=Prochlorococcus marinus (strain NATL2A) GN=purH PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.072e-47
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 1
Query:  118 ALISLSDKKDLASLGIGL-QELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            AL+S+SDK  L  L   L  +LG+ I+S+GGTA  +E++ + VT+V   T FPE+L GRVKTL+P IHGGILARRD++ H+D L +  I   DLVVVNLYPF  K  S   + +E+ IENIDIGGP MIRAAAKNH+DVLVV D   Y  L++  K  +   + R+K + +AF+H A+YD  +S W+
Sbjct:    5 ALLSVSDKTGLIPLAKALVNDLGFKIISSGGTAKLIESENLPVTRVADYTGFPEILGGRVKTLNPKIHGGILARRDKQSHLDDLDKQNINPIDLVVVNLYPFV-KTISKENVSWEEAIENIDIGGPTMIRAAAKNHQDVLVVTDPSQYSNLIDAYKSKKITTELRKKYSQQAFEHTATYDLTISNWI 190          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_BACSU (Bifunctional purine biosynthesis protein purH OS=Bacillus subtilis GN=purH PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.072e-47
Identity = 96/189 (50.79%), Postives = 133/189 (70.37%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDY-PALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+ALIS+SDK +L      L ELG  ++STGGT   L+ +GV V  + ++T FPE++DGR+KTLHPNIHGG+LA R  + HM  ++EHGI   DLVVVNLYPF + + S   + +E+ IENIDIGGP M+RAA+KNH+DV V+VD  DY P L +  +      Q +R+LA K F+H A+YD+ ++++L
Sbjct:    4 KRALISVSDKTNLVPFVKELTELGVEVISTGGTKKLLQENGVDVIGISEVTGFPEIMDGRLKTLHPNIHGGLLAVRGNEEHMAQINEHGIQPIDLVVVNLYPFKETI-SKEDVTYEEAIENIDIGGPGMLRAASKNHQDVTVIVDPADYSPVLNQIKEEGSVSLQKKRELAAKVFRHTAAYDALIADYL 191          
The following BLAST results are available for this feature:
BLAST of FC925427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_STRTD6.285e-4850.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRR66.285e-4850.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRP26.285e-4850.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_PARDP6.285e-4855.26Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_BURM16.285e-4852.63Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_RHOS58.208e-4853.44Bifunctional purine biosynthesis protein purH OS=R... [more]
PUR9_PEDPA8.208e-4852.13Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_STRP71.072e-4749.47Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_PROMT1.072e-4751.87Bifunctional purine biosynthesis protein purH OS=P... [more]
PUR9_BACSU1.072e-4750.79Bifunctional purine biosynthesis protein purH OS=B... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 TF Citrus clementina cDNA clone KN0AAP11YE08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925427 ID=FC925427; Name=FC925427; organism=Citrus clementina; type=EST; length=681bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAA
back to top