FC925427

Overview
NameFC925427
Unique NameFC925427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC925427_ssr88 microsatellite FC925427_ssr88:88..99. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig12581 contig Ccv1_Contig12581:199..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRA3 (Bifunctional purine biosynthesis protein purH OS=Streptococcus agalactiae serotype III GN=purH PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47
Identity = 94/188 (50.00%), Postives = 131/188 (69.68%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ALIS+SDK  +      L+ LG+ I+STGGT  +L++ GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  ++ I   DLVVVNLYPF + +     + ++  +ENIDIGGP+M+R+AAKNH  V VVVDS DY  +L E    +Q   + R++LA KAF+H A+YD+ ++E+
Sbjct:    3 KRALISVSDKSGIIDFAKELKNLGWDIISTGGTKVALDDAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRP-DVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDSADYATVLGELADASQTTFKTRQRLAAKAFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_RALPJ (Bifunctional purine biosynthesis protein purH OS=Ralstonia pickettii (strain 12J) GN=purH PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47
Identity = 99/190 (52.11%), Postives = 122/190 (64.21%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRK--LAWKAFQHVASYDSAVSEWL 675
            +QAL+S+SDK  +      L E G  ++STGGTA  L    + VT+V   T FPEMLDGRVKTLHP +HGGILARRD   HM ALSEH I T DL+VVNLYPF   V +       D IENIDIGGP M+R+AAKNH+DV V+VD  DY  +L  ++ N +   +     LA K F H A YD A++ +L
Sbjct:    3 QQALLSVSDKTGIVDFARALHERGVKLLSTGGTAKLLAESSLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMAALSEHSIPTIDLLVVNLYPFQQTV-AKDECSLADAIENIDIGGPTMLRSAAKNHRDVTVIVDPADYATVLAEMQANNNTVGYETNFMLAKKVFAHTAQYDGAITNYL 191          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_LEUMM (Bifunctional purine biosynthesis protein purH OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=purH PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47
Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 1
Query:  115 QALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            +AL+S+SDK  L      L ELGY +VSTGGT   L + G+ V  ++++T FPEMLDGRVKTLHP +H G+LARRD   HM  L+E  I   D+VVVNLYPF   +   G  + E  IENIDIGGP+M+R+AAKN   VL +VD +DY  ++  LK  + D+++R+ LA K FQH ASYD+ ++ +L
Sbjct:    3 RALLSVSDKSGLIPFAKNLVELGYELVSTGGTHKVLIDAGLDVISIDEVTDFPEMLDGRVKTLHPRVHAGLLARRDLPEHMAKLAEFDITPIDMVVVNLYPFKSTIQKEGVTEAE-AIENIDIGGPSMLRSAAKNFASVLPIVDPKDYDVVVNKLKAGEVDREYRKSLAAKVFQHTASYDALIANYL 188          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_BACC4 (Bifunctional purine biosynthesis protein purH OS=Bacillus cereus (strain B4264) GN=purH PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47
Identity = 97/189 (51.32%), Postives = 130/189 (68.78%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLKGNQD-DQQFRRKLAWKAFQHVASYDSAVSEWL 675
            K+AL+S+SDK  +     GL E G  ++STGGT   LE +G+ V  + ++T FPE++DGRVKTLHPNIHGG+LA RD + H+  ++E GI   D VVVNLYPF + +     + F D IENIDIGGP MIR+AAKNHK V V+VD  DY  +L  LK N +  ++ +RKLA K F+H A+YD+ +S +L
Sbjct:    3 KRALVSVSDKTGVVEFVKGLLEQGIEVISTGGTKKLLEENGLQVIGISEVTGFPEIMDGRVKTLHPNIHGGLLAVRDNETHVTQMNELGIEPIDFVVVNLYPFKETIAKP-DVTFADAIENIDIGGPTMIRSAAKNHKFVSVIVDPVDYDIVLAELKENGEVAEETKRKLAAKVFRHTAAYDALISNYL 190          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRSU (Bifunctional purine biosynthesis protein purH OS=Streptococcus suis GN=purH PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47
Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEWLWK 681
            K+ALIS+SDK  +      L + G+ I+STGGT  +L+  GV+   ++ +T FPEM+DGRVKTLHP IHGG+LARRD   H+ A ++H IG  DLVVVNLYPF + +     + ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DYP +L E  +  +     R++LA K F+H A+YD+ ++++  K
Sbjct:    3 KRALISVSDKNGIVEFAQELTKFGWEIISTGGTKVALDQAGVTTIAIDDVTGFPEMMDGRVKTLHPKIHGGLLARRDLDSHLQAANDHEIGLIDLVVVNLYPFKETILRP-DVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYPTVLGEIAEQGETSYATRQRLAAKVFRHTAAYDALIADYFTK 192          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRA1 (Bifunctional purine biosynthesis protein purH OS=Streptococcus agalactiae serotype Ia GN=purH PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47
Identity = 94/188 (50.00%), Postives = 130/188 (69.15%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ALIS+SDK  +      L+ LG+ I+STGGT  SL++ GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  ++ I   DLVVVNLYPF + +     + ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L E    +Q   + R++LA KAF+H A+YD+ ++E+
Sbjct:    3 KRALISVSDKSGIVDFAKELKNLGWDIISTGGTKVSLDDAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRP-DVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYATVLGELADASQTTFKTRQRLAAKAFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_CHRVO (Bifunctional purine biosynthesis protein purH OS=Chromobacterium violaceum GN=purH PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.075e-47
Identity = 103/190 (54.21%), Postives = 125/190 (65.79%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALLEFLK--GNQDDQQFRRKLAWKAFQHVASYDSAVSEWL 675
            ++ALIS+SDK  +      L  LG  I+STGGTA  L   G+ VT+V   T FPEMLDGRVKTLHP +HGGIL RRD   H+  ++EHGIG  DLV VNLYPF   V +      ED IENIDIGGP M+R+AAKN   V +V DS DYPAL+  LK  G +  +  R +LA KAF H A+YD A+S +L
Sbjct:    5 ERALISVSDKNGVLEFARELSALGVHILSTGGTAKLLLEAGLPVTEVSDYTGFPEMLDGRVKTLHPKVHGGILGRRDLPEHVATMAEHGIGNIDLVCVNLYPFEATVANP-DCSLEDAIENIDIGGPTMVRSAAKNWAHVAIVTDSADYPALVGELKANGGRLAKATRFELAKKAFTHTAAYDGAISNYL 193          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRPM (Bifunctional purine biosynthesis protein purH OS=Streptococcus pyogenes serotype M28 GN=purH PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.185e-46
Identity = 94/188 (50.00%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ALIS+SDK  +      L+ LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  ++ I   DLVVVNLYPF + +     I ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L E     Q   + R++LA K F+H A+YD+ ++E+
Sbjct:    3 KRALISVSDKSGIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRP-DITYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYATVLGELADAGQTTFETRQRLAAKVFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRPC (Bifunctional purine biosynthesis protein purH OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=purH PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.185e-46
Identity = 94/188 (50.00%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ALIS+SDK  +      L+ LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  ++ I   DLVVVNLYPF + +     I ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L E     Q   + R++LA K F+H A+YD+ ++E+
Sbjct:    3 KRALISVSDKSGIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRP-DITYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYATVLGELADAGQTTFETRQRLAAKVFRHTAAYDALIAEY 189          
BLAST of FC925427 vs. ExPASy Swiss-Prot
Match: PUR9_STRPB (Bifunctional purine biosynthesis protein purH OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=purH PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.185e-46
Identity = 94/188 (50.00%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  112 KQALISLSDKKDLASLGIGLQELGYTIVSTGGTATSLENDGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKHHMDALSEHGIGTFDLVVVNLYPFYDKVTSAGGIDFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSEDYPALL-EFLKGNQDDQQFRRKLAWKAFQHVASYDSAVSEW 672
            K+ALIS+SDK  +      L+ LG+ I+STGGT  +L+N GV    ++ +T FPEM+DGRVKTLHPNIHGG+LARRD   H+ A  ++ I   DLVVVNLYPF + +     I ++  +ENIDIGGP+M+R+AAKNH  V VVVD  DY  +L E     Q   + R++LA K F+H A+YD+ ++E+
Sbjct:    3 KRALISVSDKSGIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRP-DITYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYATVLGELADAGQTTFETRQRLAAKVFRHTAAYDALIAEY 189          
The following BLAST results are available for this feature:
BLAST of FC925427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 468
Match NameE-valueIdentityDescription
PUR9_STRA36.948e-4750.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_RALPJ6.948e-4752.11Bifunctional purine biosynthesis protein purH OS=R... [more]
PUR9_LEUMM6.948e-4750.80Bifunctional purine biosynthesis protein purH OS=L... [more]
PUR9_BACC46.948e-4751.32Bifunctional purine biosynthesis protein purH OS=B... [more]
PUR9_STRSU9.075e-4748.17Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRA19.075e-4750.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_CHRVO9.075e-4754.21Bifunctional purine biosynthesis protein purH OS=C... [more]
PUR9_STRPM1.185e-4650.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRPC1.185e-4650.00Bifunctional purine biosynthesis protein purH OS=S... [more]
PUR9_STRPB1.185e-4650.00Bifunctional purine biosynthesis protein purH OS=S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YE08FM1 TF Citrus clementina cDNA clone KN0AAP11YE08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925427 ID=FC925427; Name=FC925427; organism=Citrus clementina; type=EST; length=681bp
CACACTACCTCTCTGCGCTCCAGTTACTCTCCTATCAGAGCCATGGCCCA
CTCTCACACCGTTTCTGTTCCAACCAATCAACCCCCGTCCTCCTCCTCCT
CTCAAGCGAATAAGCAGGCATTGATTTCTTTGTCGGATAAAAAGGATTTG
GCATCTCTTGGAATTGGGTTACAAGAACTGGGGTACACAATTGTTTCCAC
CGGAGGAACAGCTACTTCTCTAGAAAATGATGGGGTGTCTGTGACTAAAG
TGGAGCAGCTCACCTGTTTCCCGGAAATGCTGGATGGCCGTGTAAAAACT
TTGCACCCCAACATTCACGGAGGTATTCTTGCCAGAAGAGACCAAAAGCA
TCATATGGATGCTCTCAGTGAGCATGGAATTGGTACATTTGATCTAGTAG
TAGTGAACTTGTACCCCTTCTATGATAAAGTTACTTCTGCTGGAGGGATT
GATTTTGAGGATGGAATTGAGAACATTGATATTGGGGGCCCTGCCATGAT
CAGAGCTGCTGCAAAGAACCACAAGGATGTGCTGGTTGTAGTTGACTCGG
AAGATTATCCTGCCCTCCTAGAATTTCTTAAAGGAAACCAGGATGATCAA
CAGTTTCGTAGAAAACTTGCTTGGAAAGCGTTTCAACATGTTGCTTCATA
TGATTCTGCAGTGTCAGAGTGGCTGTGGAAA
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