FC925447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.652e-27 Identity = 68/192 (35.42%), Postives = 115/192 (59.90%), Query Frame = 1 Query: 16 APVPTFYRIYRKKSTESFQSLPYLVALFSSMLWFYYAL--VKQNAFLLVTINCFGCVIETIYIILFITYAP-KGSRNSTVKLFVSMNVGVFSLILLLTHF-LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGL-FQKDICVALPNIVGFLLGLTQMLLYVIY 576 AP TF+RI++KKS E F +PY+ + + MLW +Y L V +++ L+ TIN G VIE Y+ +++ Y K + + F+++ V + I+L+T F L D + +G IC +++++ AP + +V++TKSVE+MPF+LS ++A +W Y L F+ D V N +G L L+Q+++Y +Y Sbjct: 25 APAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSLIFKIDYYVLASNGIGTFLALSQLIVYFMY 216
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 51/178 (28.65%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 49 KKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLL-----THFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLY 567 ++S E+ Q LP+L +++ WFYY +K + L++ +N G ++++Y+ ++ Y+P+ + +V V V +LLL T ++ ++R+ LG C ++S++ +PL+ +AQ+IR+KS + + F L+ L++ W YGL Q D+ + +PN G + L + L+ Sbjct: 32 QRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPE-------RRYVGSQVLVSLGVLLLGYCYFTLWILDLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGLVQSDLYITVPNFPGIVTSLVRFWLF 201
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 51/176 (28.98%), Postives = 98/176 (55.68%), Query Frame = 1 Query: 49 KKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIY 576 K+S E+ Q LP+L +++ WFYY +K + L++ +N G ++T+Y+ +I Y+ + R ++ VS+ V +F T + ++R+ LG C ++S++ +PL+ +AQ+I++KS + + F L+ L++ W YG Q D+ + +PN G + L + L+ Y Sbjct: 32 KRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLII-VNLIGASLQTLYMAAYILYSLE-RRYVVSQVLVSLGV-LFLAHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYGWVQSDLYITVPNFPGIVTSLLRFWLFSRY 204
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_DROPS (RAG1-activating protein 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=slv PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 49/178 (27.53%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 46 RKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRIL-ILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIY 576 +KKST +P++ S W Y ++ + + V +N G + IY +++ + ++ + V+ F + + +++++ T+ LA ++ I G C V+V FAAPL+ + VIR K+ E +P L L ++ W YG+ D + +PN +G LL + Q+ L+V+Y Sbjct: 33 QKKSTGDSSGVPFICGFLSCSFWLRYGVLTEEQSI-VLVNIIGSTLFLIYTLIYYVFTV--NKRAFVRQFAFVLAVLIAVVVVYTNRLADQRDEMIRITGIFCCIVTVCFFAAPLATLLHVIRAKNSESLPLPLIATSFLVSLQWLIYGILISDSFIQIPNFLGCLLSMLQLSLFVVY 207
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 49/179 (27.37%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 46 RKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPK--GSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIY 576 R +S ++ Q LP+L +++ W Y ++K + L++ +N G V++T+YI+ ++ Y+P+ G T L + +G LL+ A R+ LG C ++S++ +PL+ +A++++TKS + + F L+ + W YG +D + +PN+ G L L ++ L+ Y Sbjct: 35 RTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVPDLEA----RLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYGFRLRDPYITVPNLPGILTSLIRLGLFCKY 208
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_DROME (RAG1-activating protein 1 homolog OS=Drosophila melanogaster GN=slv PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 49/178 (27.53%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 46 RKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRIL-ILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIY 576 +KKST +P++ S W Y ++ N +V +N G + +Y +++ + ++ + VK F + V ++++ T+ L R++ + G +C V+V FAAPL+ + VIR K+ E +P L + ++ W YG+ D + +PN +G +L L Q+ L+V+Y Sbjct: 34 QKKSTGDSSGVPFICGFLSCSFWLRYGVLT-NEQSIVLVNIIGSTLFLVYTLIYYVFTV--NKRACVKQF-GFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQIPNFLGCILSLLQLGLFVLY 207
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_DICDI (RAG1-activating protein 1 homolog OS=Dictyostelium discoideum GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 52/192 (27.08%), Postives = 96/192 (50.00%), Query Frame = 1 Query: 13 LAPVPTFYRIYRKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAP--KGSRNSTVKLFVSMNVGVFSLILLLTHFLATDS--TRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIY 576 + P+ T I KK+ + L ++ ++ + LW YAL+ N +L +N G + Y+ + + SR+ K+ ++ + + I+ ++++ D TRI LG++ V V +FA+PL +A VI++K+ E M ++ L + W +GL DI + LPNI+ +L Q+ L +Y Sbjct: 26 IMPLKTIRLIIEKKNVGTVAGLQFISSVLNCFLWISYALLTSNTTMLF-VNSIGMMFSIYYVFNYWKNINQVRASRDYLKKVMIACVLAI--TIISISYYNTVDDLDTRISRLGFLSSVVCVLMFASPLEKMAIVIQSKNSEGMIINVAILSLLCGLSWTIFGLLLNDIYIYLPNILASILSFVQLTLIKLY 214
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 47/176 (26.70%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 52 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGV----FSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLY 567 +S ++ Q LP+L +++ W YY L+K + ++ +N G ++T+YI + Y + R T L + + V FSL++ + ++ LG C ++S++ +PL+ + ++RTKSVE + F L+ ++ W YGL D + +PN G L + L+ Sbjct: 33 QSADNVQFLPFLTTCLNNLGWLYYGLLKGDG-TVIFVNIIGAFLQTVYIATYCHYTKEKRRVYTQTLLMVSVLCVAWVYFSLVI------SPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGLQLGDYYIMVPNTPGIFTSLIRFFLF 201
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 48/178 (26.97%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 52 KSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIY 576 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ LG C ++S++ +PL+ +A+VI+TKS + + + L+ L++ W YG +D + + N G + + L+ Y Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKY 208
BLAST of FC925447 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEBR (RAG1-activating protein 1 homolog OS=Caenorhabditis briggsae GN=CBG13500 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 52/204 (25.49%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 22 VPTFYRIYRKKSTESFQSLPYLVALFSSMLWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYA-PKGSRNSTVKLFVSMNVGVFSLILLLTHFLATDSTRILILGWICVAVSVSVFAAPLSIVAQVIRTKSVEFMPFILSFFLTLSAIMWFAYGLFQKDICVALPNIVGFLLGLTQMLLYVIYKNANKVIIEEKKLPEAQL 630 +P +I R+ + +P+L+ + W Y L+K + + ++ +N G +Y I F+ Y+ PK K F + V S I + ++A + LG IC+ ++ F APL+ + V+R + V +P + L + W YG +DI + +PN +G L + Q+ L+++ E +K P QL Sbjct: 25 IPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGLLKMD-YTMIIVNVVGVFCMAVYCIFFLIYSLPK-------KTFTCQLILVTSTITGMVVWIAF-KPNLDYLGIICMTFNIMNFGAPLAGLGVVLRNREVSTLPLPMCVANFLVSSQWCLYGNLVQDIYIIIPNGIGMFLAIVQLSLFIVLPRR-----ENEKSPLEQL 214 The following BLAST results are available for this feature:
BLAST of FC925447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925447 ID=FC925447; Name=FC925447; organism=Citrus clementina; type=EST; length=691bpback to top |