FC925451

Overview
NameFC925451
Unique NameFC925451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_PANAR (Glutamine synthetase OS=Panulirus argus PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.981e-47
Identity = 94/194 (48.45%), Postives = 125/194 (64.43%), Query Frame = 1
Query:  133 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            K  A YIW+ G+G ++RSK RTL      PS+LP WN+DGSSTGQA   +S+V LYP A+++DPFR GNN LV+C+ Y    +P  TN+R    ++ + +    + PW+G+EQEYTLL  D K PL                   A++ +GRD+V++HY+ACL AGINISG N +VMP QWEFQVGP  GI+ G
Sbjct:   22 KCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTGQAERSNSDVYLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVMTRA--ADQHPWFGMEQEYTLLDID-KHPLGWPKNGYPGPQGPYYCGVGANRVYGRDVVEAHYRACLCAGINISGENAKVMPAQWEFQVGPCEGITMG 212          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.378e-47
Identity = 97/195 (49.74%), Postives = 124/195 (63.59%), Query Frame = 1
Query:  136 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVK---WPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGIS 708
            IIAEY+WI   G  +RSK RTL   V+    LP+WN+DGSSTGQAPG DS++ L P A + DPFRRG+NI+V+ + +   G P   N RH AAK+F +H D    E W+G+EQEYTL  +  +   WP                    A K + RD++++HY+ACLYAG+NISGIN EVMP QWEFQVGP  GI+
Sbjct:   26 IIAEYVWIDSEG-GLRSKGRTLNKKVTSVDSLPEWNFDGSSTGQAPGHDSDIYLKPVAFYPDPFRRGDNIVVLAECWNNDGTPNKFNHRHEAAKLFEAHKDA---EMWFGLEQEYTLFDQYDQVYGWP----KGGFPAPQGPYYCGVGAGKVFARDVIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGIA 212          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_TUBBO (Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47
Identity = 100/197 (50.76%), Postives = 122/197 (61.93%), Query Frame = 1
Query:  136 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQ---KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            I+AEYIWI G+   +RSK +TL    S    LP+WN+DGSSTGQAPGEDS++ L P AIF DPFR G+NILV+ + +   G P   N RH  AKI  +H D   ++PW+G+EQEYTL         WP                      K + RDIV++HYKACL+AGI ISGIN EV+P QWEFQVGP VGI  G
Sbjct:   26 ILAEYIWIDGAN-GVRSKTKTLFKKPSSVEDLPEWNFDGSSTGQAPGEDSDIYLRPVAIFPDPFRMGDNILVLAECWNADGSPNKFNHRHECAKIMEAHKD---QKPWFGLEQEYTLFDLYGNPYGWP----KGGFPGPQGPYYCGVGTGKVYCRDIVEAHYKACLFAGIKISGINAEVLPSQWEFQVGPCVGIEMG 214          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.526e-47
Identity = 97/197 (49.24%), Postives = 124/197 (62.94%), Query Frame = 1
Query:  136 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKD---VKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            +IAEYIW+  +G  +RSK RTL   V    +LP+WN+DGSSTGQAPG DS+V L P A + DPFRRG+NI+V+ + +   G P   N RH AAK+F +H    A + W+G+EQEYTL   +     WP                    A K + RD+V++HY+ACLYAG+ ISGIN EVMP QWEFQVGP  GI+ G
Sbjct:   23 VIAEYIWVDSAG-HLRSKGRTLQRRVESVDELPEWNFDGSSTGQAPGHDSDVYLKPVAFYPDPFRRGDNIIVLAECWNNDGTPNKYNHRHEAAKLFEAHR---AADIWFGLEQEYTLFDHNDNVYGWP----KGGFPAPQGPYYCGVGAGKVYARDVVEAHYRACLYAGLRISGINAEVMPSQWEFQVGPCTGITMG 211          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.371e-46
Identity = 95/196 (48.47%), Postives = 120/196 (61.22%), Query Frame = 1
Query:  130 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            DK+ AEY+WI G G  +RSK  T+    +D  +L  W++DGSST QAPG DS+V L P AIFKDPFR G+NILV+ + +   G P  TN RH   K+    D+  +  PW+G+EQEYTL   D   P                      K + RD++++HY+ACLYAG+NISGIN EVMP QWEFQVGP  GIS G
Sbjct:   20 DKVQAEYVWIDGDG-GLRSKTMTMTKKTTDIGQLRIWDFDGSSTNQAPGGDSDVYLRPAAIFKDPFRGGDNILVLAETFNNDGTPNRTNHRHHTKKVM---DLAKDSVPWFGLEQEYTLFDAD-GTPFGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGISMG 210          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.371e-46
Identity = 94/193 (48.70%), Postives = 119/193 (61.66%), Query Frame = 1
Query:  136 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            ++AEYIWI   G   RSK +TL    S   +LP+WN+DGSST QAPG++S+V L P A++ DPFRRG+NILV+C+ +   G P   N RH  A++        EE W+G+EQEYTLL  D  WP                      K + RDIV++HY+ACLYAG+ ISGIN EVMP QWE+QVGP  GI  G
Sbjct:   12 VMAEYIWIDAHG-GTRSKTKTLSKAPSSVDELPEWNFDGSSTAQAPGDNSDVYLRPVAMYPDPFRRGDNILVLCETWDSDGSPNKFNYRHDCARLMETH--AKEEFWFGLEQEYTLLGPD-GWPYGWPKGGFPGAQGPYYCGVGTGKVYCRDIVEAHYRACLYAGVKISGINAEVMPSQWEYQVGPCHGIEMG 200          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_AMAMU (Glutamine synthetase OS=Amanita muscaria GN=GLN1 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.371e-46
Identity = 97/194 (50.00%), Postives = 118/194 (60.82%), Query Frame = 1
Query:  133 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            K  AEY+WI G G  +RSK  T+   V+D S+L  W++DGSST QAP  +S+V L P AIFKDPFR G NILV+ + Y   G P  TN RH  AK+   +    E PW+GIEQEYTL   D   P                      K + RD++++HY+ACLYAG+NISGIN EVMP QWEFQVGP  GIS G
Sbjct:   21 KFHAEYVWIDGDG-GLRSKTTTVDQKVTDISQLRVWDFDGSSTNQAPSGNSDVYLRPSAIFKDPFRGGENILVLSETYNNDGTPNRTNHRHHTAKVMELAK--DEIPWFGIEQEYTLFDADGS-PYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGISMG 210          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_COLGL (Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.087e-45
Identity = 97/193 (50.26%), Postives = 115/193 (59.59%), Query Frame = 1
Query:  136 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            I+AEYIWI   G + RSK+RTL      P  LP WN+DGSSTGQAPG++S+V L P A+F DPFR   NILV+ + +   G P   N RH  AK+       A EPW+G+EQEYTLL    + P                      K   RDIVD+HYKACLY+G+ ISG N EVMP QWEFQVGP VGI  G
Sbjct:   26 IMAEYIWIDADG-ETRSKSRTLKEKEYTPEDLPMWNFDGSSTGQAPGDNSDVYLKPVAVFPDPFRGSPNILVLSECWNADGTPNKYNYRHECAKLMEAH--AAHEPWFGLEQEYTLLDLSNR-PFGWPANGFPAPQGPYYCGVGTGKVVQRDIVDAHYKACLYSGVKISGTNAEVMPAQWEFQVGPCVGIEMG 214          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_SCHPO (Glutamine synthetase OS=Schizosaccharomyces pombe GN=gln1 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.854e-45
Identity = 98/198 (49.49%), Postives = 121/198 (61.11%), Query Frame = 1
Query:  133 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLL---QKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            K++AEYIWI G    +RSK  TL    S   +L  WN+DGSSTGQAPG +S+ +L P A++ DPFRRG+NILV+   YT  G P   N R A AK+   H+D   +E W+GIEQEYT+L    +   WP                      + + RDIV++HYKACLYAGINISGIN EVMP QWE+QVGP  GI  G
Sbjct:   27 KVMAEYIWIDGFN-HLRSKTMTLDAKPSSIDQLRVWNFDGSSTGQAPGNNSDTLLKPVAMYNDPFRRGDNILVLAACYTADGSPNGFNHRDACAKLLEKHAD---KETWFGIEQEYTMLDYYDRPFGWP----KGGFPGPQGPFYCGVGTGRVFARDIVEAHYKACLYAGINISGINAEVMPSQWEYQVGPCAGIEMG 216          
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_DEBHA (Glutamine synthetase OS=Debaryomyces hansenii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.162e-45
Identity = 91/195 (46.67%), Postives = 122/195 (62.56%), Query Frame = 1
Query:  133 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714
            K++AEY+WI   G + RSK +TL    S    LP+WN+DGSSTGQAPG DS+V L P A + DPFR+G+NI+V+ + +   G P   N RH +AK+  +H+D   EE W+G+EQEYTL  +    P                      K + RD++++HY+ACL+AG++ISGIN EVMP QWEFQVGP  GI  G
Sbjct:   22 KVLAEYVWIDADG-NSRSKCKTLDKKPSSVEDLPEWNFDGSSTGQAPGHDSDVYLRPVAFYADPFRKGDNIIVLTECWNNDGTPNKFNHRHESAKLMKAHAD---EEVWFGLEQEYTLFDQ-FDQPYAWPKGGFPAPQGPYYCGVGTGKVYARDLIEAHYRACLHAGVDISGINAEVMPSQWEFQVGPCEGIQMG 211          
The following BLAST results are available for this feature:
BLAST of FC925451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_PANAR1.981e-4748.45Glutamine synthetase OS=Panulirus argus PE=2 SV=1[more]
GLNA_KLULA3.378e-4749.74Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_TUBBO7.526e-4750.76Glutamine synthetase OS=Tuber borchii GN=GLN1 PE=2... [more]
GLNA_ASHGO7.526e-4749.24Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE... [more]
GLNA_SUIBO6.371e-4648.47Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_EMENI6.371e-4648.70Glutamine synthetase OS=Emericella nidulans GN=gln... [more]
GLNA_AMAMU6.371e-4650.00Glutamine synthetase OS=Amanita muscaria GN=GLN1 P... [more]
GLNA_COLGL1.087e-4550.26Glutamine synthetase OS=Colletotrichum gloeosporio... [more]
GLNA_SCHPO1.854e-4549.49Glutamine synthetase OS=Schizosaccharomyces pombe ... [more]
GLNA_DEBHA3.162e-4546.67Glutamine synthetase OS=Debaryomyces hansenii GN=G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YI09FM1 TF Citrus clementina cDNA clone KN0AAP3YI09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925451 ID=FC925451; Name=FC925451; organism=Citrus clementina; type=EST; length=714bp
AGCACATTAACTTTCCTTCAATCACAGCAATCTCATTACCAGTTTCTTTG
TTGTGTTAAGAGACTAAAGAGTCTTCGAAACATGTCTCTGCTCTCAGATC
TCCTTAACCTTAACCTCTCAGAATCCACTGACAAGATCATCGCTGAGTAC
ATATGGATCGGTGGATCTGGCATGGACATGAGGAGCAAAGCAAGGACTCT
TCCCGGTCCCGTTAGTGATCCTTCCAAGCTGCCTAAGTGGAATTATGATG
GTTCCAGCACAGGCCAAGCACCTGGAGAAGATAGTGAAGTGATCCTCTAT
CCTCAAGCTATTTTCAAGGATCCATTCAGGAGAGGCAACAATATTCTTGT
TATGTGTGATGCTTACACTCCTGCGGGAGAACCAATTCCAACAAACAAAA
GACATGCAGCTGCCAAGATTTTCAGCCATTCTGACGTTGTGGCTGAAGAA
CCATGGTATGGTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTTAA
ATGGCCTCTTGGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACCAT
ACTACTGTGGTGTTGGTGCTGACAAAGCTTGGGGGCGCGACATTGTAGAC
TCCCATTACAAGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATCAA
TGGAGAAGTCATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGTTG
GAATTTCTGCTGGA
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