FC925451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.573e-36 Identity = 83/201 (41.29%), Postives = 113/201 (56.22%), Query Frame = 1 Query: 142 AEYIWIGGS------GM---DMRSKARTLPGPVS-DPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714 AEYIW G+ GM +MRSK + P+ D S+ P W++DGSSTGQA G +S+ IL P + DP R ++LVMC+ + P G+P TN R +I V AE+ WYG EQEYT+L K A+ A+GR + ++H +AC+ AG+ ISGIN EVMPGQWE+Q+GP ++ G Sbjct: 37 AEYIWADGNEGKPEKGMIFNEMRSKTKCFEAPLGLDASEYPDWSFDGSSTGQAEGNNSDCILRPVRVVTDPIRGAPHVLVMCEVFAPDGKPHSTNTRAKLREIID-DKVTAEDCWYGFEQEYTMLAKTSGHIYGWPAGGFPAPQGPFYCGVGAESAFGRPLAEAHMEACMKAGLVISGINAEVMPGQWEYQIGPVGPLALG 236
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33 Identity = 80/186 (43.01%), Postives = 104/186 (55.91%), Query Frame = 1 Query: 142 AEYIWIGGSG--MDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP 693 AEYIWI G+ +RSK + + G + LP W +DGSST QA G S+ +L P DP R G++ILV+C+ P +N R A A++ A+EP +GIEQEYT Q +PL AD+ +GRD+V++H CL AG+ ISGIN EVMPGQWEFQVGP Sbjct: 5 AEYIWIDGTEPTAKLRSKTKIITGQPAGLDALPIWGFDGSSTNQAEGHSSDCVLKPVFTCPDPIRGGDDILVLCEVLNIDLTPHASNTRAALAEVAER--FAAQEPIFGIEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKAGLAISGINAEVMPGQWEFQVGP 186
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30 Identity = 80/188 (42.55%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 136 IIAEYIWIGGSG--MDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPL-XXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVG 690 I AEYIWI G+ +RSK + L SD S+LP+W +DGSST QA G S+++L P DP R G+++LV+C+ P P+N R + +EP +GIEQEYT L+ D PL AD +GR+IV+ H CL AG+ +SGIN EVMPGQWEFQVG Sbjct: 3 IKAEYIWIDGTQPTAKLRSKTKIL----SDGSRLPRWGFDGSSTNQAEGHASDLVLEPVFSCPDPIRGGDHLLVLCEVLHTDLTPHPSNTRALLRPVAER--FAGQEPIFGIEQEYTFLKGD--RPLGFPEGGGYPAPQADYYCGVGADAIFGREIVEKHLDLCLAAGLGLSGINAEVMPGQWEFQVG 182
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26 Identity = 79/196 (40.31%), Postives = 102/196 (52.04%), Query Frame = 1 Query: 142 AEYIWIGGSGMD--MRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFS-HSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVG----PAVG 702 AEYIWI G+ + MRSK R + D + W +DGSST QAPG +S+ +L P DP R G+N LV+C+ P PTN R AA + ++D+ P +GIEQEYT + + WP K GR IV+ H +ACL AG+ I G N EVM GQWEFQ+G PA+G Sbjct: 5 AEYIWIDGTEPEPLMRSKTRI----IKDGKEPEIWGFDGSSTNQAPGSNSDCVLRPVFETPDPIRGGDNRLVLCEVQLTDFTP-PTNTRAAALGVAERYADM---SPMFGIEQEYTFFKDGRPYGWP----EVGYPAPQGPYYCGVGGSKMPGRQIVERHTQACLDAGLAIEGTNAEVMMGQWEFQIGVLPAPAIG 188
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.094e-21 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 442 AEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAG 714 A+EPW+GIEQEYTLL KWPL A ++ GRDI + HY+ CL+AGI ISG+NGEV+P QWE+QVGP GI+ G Sbjct: 2 AQEPWFGIEQEYTLLNSVTKWPLGWPKGGYPAGQGPYYCSVGAGRSIGRDIPEVHYRCCLHAGIQISGVNGEVLPSQWEYQVGPVEGIAMG 92
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.005e-20 Identity = 69/187 (36.90%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 145 EYIWIGGSGMDMRSKART-LPGPVSDPS--KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQV 687 EYIW+ G + +T + S P+ +LP W +DGSST QA G S+ +L P A+F D R N +LVMC+ P G+ P +NKR A I + W+G EQEY + + + +P D A R IV+ H CL AGIN GIN EV GQWEFQ+ Sbjct: 7 EYIWLDGYTPTPNLRGKTQIKEFASFPTLEQLPLWGFDGSSTQQAEGHSSDCVLKPVAVFPDAART-NGVLVMCEVMMPDGKTPHASNKR---ATILDDAGA-----WFGFEQEYFFYKDGRPLGFPTSGYPAPQGPYYTGVGFSNVGDVA--RKIVEEHLDLCLAAGINHEGINAEVAKGQWEFQI 182
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18 Identity = 68/189 (35.98%), Postives = 86/189 (45.50%), Query Frame = 1 Query: 133 KIIAEYIWIGGSGMDMRSKARTLPGPVSD---PSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKA-WGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQV 687 K EYIW+ G + +T + +LP W +DGSST QA G S+ +L P AI+ DP R N LVMC+ P G +N R A I E+ W+G EQEY Q PL ++ R+IV+ H CL AGIN GIN EV GQWEFQ+ Sbjct: 3 KFKLEYIWLDGYTPVPNLRGKTQIKEFDEFPTLEQLPLWGFDGSSTMQAEG-SSDCVLKPVAIYPDP-ARTNGALVMCEVMMPDGHAHASNAR---ATILDD-----EDAWFGFEQEYFFYQNG--RPLGFPEQGYPAPQPYYTGVGYSNVGDVAREIVEEHLDLCLAAGINHEGINAEVAKGQWEFQI 179
BLAST of FC925451 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 66/192 (34.38%), Postives = 83/192 (43.23%), Query Frame = 1 Query: 145 EYIWIGGSGMDMRSKARTLPGPVSDPS--------KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQV 687 EYIW+ D +TL G +LP W +DGSST QA G S+ +L P ++ DP R N LVMC+ P E P +N R E W+G EQEY + + + +P D A R IV+ H CL AGIN GIN EV GQWEFQ+ Sbjct: 7 EYIWL-----DATRPYQTLRGKTQIKEFDAFPTLEQLPLWGFDGSSTLQAEGRTSDCVLKPVTVYPDPVRT-NGALVMCEVMMPDAETPHASNTRATVLD--------DEGAWFGFEQEYFFYKNGRPLGFPEQGYPAPQGPYYTGVGYKNVGDVA--RQIVEEHLDICLAAGINHEGINAEVAKGQWEFQI 182 The following BLAST results are available for this feature:
BLAST of FC925451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925451 ID=FC925451; Name=FC925451; organism=Citrus clementina; type=EST; length=714bpback to top |