FC925464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 264 RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 RI+ L ++ERL E + RS++ LR P G + E++DE+ AIV + GP + V I ++D+ +L PG + + + ++VV +L DP V +V + P +Y DIGGL Q+QE+ Sbjct: 25 RIRQLELQVRMLEADKERL---ERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQEL 152
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 42/131 (32.06%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 264 RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 RI+ L ++ERL E + RS++ LR P G++ E++D++ AIV + GP + V I ++DK +L PG + + + ++++ +L DP V +V + P +Y DIGGL Q+QE+ Sbjct: 22 RIRQLELQVRMLEADKERL---ERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQEL 149
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.107e-13 Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 309 QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 +E++ Q+E E ++++ L P + E+ID+N +V SS GP V + + VD L+PG + ++N+ ++V +L DP+V M+VE+ P + D+GGL+ QI+EI Sbjct: 37 KEKISLQKE-LEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREI 151
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 246 RLLKLERIKDYLLMEEEFVTNQ-ERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 ++ LE D+ ++EE++ + + LK + A+E+ V +R P+ +G L E++D N IV S+ G V ILS +D++ L+P ++ + ++V L E D + ++ ++ P ESY+DIGG D Q QE+ Sbjct: 28 KMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEE---VKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEM 162
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 42/143 (29.37%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 228 LSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 L++ + ++L+LE L ++ ++K + E + + +D LR P+ +G + + ++E A+V SS GP + V + FV+ D + PG + ++ + L+VV +L E D M++E+ P + DIGGL+ QI++I Sbjct: 27 LAELESKVLRLE------LKNKDITRENVQIKKENEILKRE---LDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDI 160
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.693e-13 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 330 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 E + + +S+ + LR P+ +G + +++D N IV SS GP + V V+ D ++PG ++ + L++V LL D V M++ +P E Y DIGGL QI E+ Sbjct: 82 EREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEV 190
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 41/142 (28.87%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 246 RLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEED----RSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 R+ +LE +L + + +++R L+ Q+ K E + +S++D ++ SP+ +G + ++I + IV SS GP++ V + ++D+ +L PG + ++ L++ ++ +P V+ M+V ++ Y IGGLD QIQE+ Sbjct: 30 RVRQLESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLDEQIQEL 171
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.045e-12 Identity = 41/142 (28.87%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 246 RLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEED----RSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 R+ +LE +L + + +++R L+ Q+ K E + +S++D ++ SP+ +G + ++I + IV SS GP++ V + ++D+ +L PG + ++ L++ ++ +P V+ M+V ++ Y IGGLD QIQE+ Sbjct: 30 RVRQLESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQEL 171
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.329e-12 Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 330 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 E + + +S+++ L+ P+ VG + ++ID +V SS GP + V + V+ L+ G ++ + L++V +L D V M++ AP E+Y DIGGL+ QI EI Sbjct: 57 EREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEI 165
BLAST of FC925464 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12 Identity = 43/152 (28.29%), Postives = 79/152 (51.97%), Query Frame = 3 Query: 219 VTPLSKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDR------SKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEI 656 ++ SK L +K ++ L EE E+ + +K + +R S++D L+ P+ VG + +++ I+ SS GP++ V F++ ++ PG + ++ + L+V+ +L DP V M+V +P Y IGGL+AQI E+ Sbjct: 20 LSDFSKYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINEL 171 The following BLAST results are available for this feature:
BLAST of FC925464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925464 ID=FC925464; Name=FC925464; organism=Citrus clementina; type=EST; length=658bpback to top |