FC925466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925466 vs. ExPASy Swiss-Prot
Match: ERD2_PLAF7 (ER lumen protein retaining receptor OS=Plasmodium falciparum (isolate 3D7) GN=ERD2 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.471e-38 Identity = 72/165 (43.64%), Postives = 116/165 (70.30%), Query Frame = 2 Query: 164 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFTNYISFYNTIMKLIFLGSSFSIVWYIKRHKIVHRSYDKDQDTFR-HWFIVLPCLVLALLINERFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALY 655 MNIFRL GD+ HL S+ +L++K+ K+C GIS + QELY +VF RY+D+F ++SFYNT+MK+ F+ + ++ I+ + ++Y++ D F+ +++ PCLVL+LL + + ++W+FS++LE+VAILPQLVLL++ R ++N+T YV +G YRA Y Sbjct: 1 MNIFRLIGDILHLVSMYILIMKLKKSKNCIGISCRMQELYLIVFLCRYIDLFFVFVSFYNTVMKITFILTIAYTIYLIRLKLPISQTYNRKVDNFKSEKYLIPPCLVLSLLTCKTYNLYNILWSFSIWLESVAILPQLVLLEKQREVENITSHYVITMGLYRAFY 165
BLAST of FC925466 vs. ExPASy Swiss-Prot
Match: ERD2_SCHPO (ER lumen protein retaining receptor OS=Schizosaccharomyces pombe GN=erd2 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.026e-32 Identity = 69/164 (42.07%), Postives = 106/164 (64.63%), Query Frame = 2 Query: 164 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFTNYISFYNTIMKLIFLGSSFSIVWYIKRHKIVHRSYDKDQDTFRHWFIVLPCLVLALLINERFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALY 655 M F GDM HLA++ +LL ++ K+C+G+SLK+ L+ LV+ TRYL++F Y S Y +M+++F+ S I + + + +YDK DTFR +I+ C VLAL+ +T ++WTFS++LE+VAILPQL +LQR+ ++LT Y+F + YR LY Sbjct: 1 MTFFSALGDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTRYLNLFWRYKSLYYFLMRIVFIASESYICYLMLM--TLRPTYDKRLDTFRTEYILGGCAVLALIYPTSYTISNILWTFSIWLESVAILPQLFMLQRSGETESLTAHYLFAMCLYRGLY 162
BLAST of FC925466 vs. ExPASy Swiss-Prot
Match: ERD2_YEAST (ER lumen protein retaining receptor OS=Saccharomyces cerevisiae GN=ERD2 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.699e-32 Identity = 72/168 (42.86%), Postives = 110/168 (65.48%), Query Frame = 2 Query: 164 MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFATRYLDIFT-NYISFYNTIMKLIFLGSSFSIVWYI---KRHKIVHRSYDKDQDTFRHWFIVLPCLVLALLINERFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALY 655 MN FR+ GD++HL S+L+L+ I T + GIS KTQ LYALVF TRYLD+ T +++S YN +MK+ F+ S+ IV + KR + + DTF+ +++ ++++ + +FTF E+ W+FS++LE+VAILPQL +L + +LT Y+F +G YRALY Sbjct: 1 MNPFRILGDLSHLTSILILIHNIKTTRYIEGISFKTQTLYALVFITRYLDLLTFHWVSLYNALMKIFFIVSTAYIVVLLQGSKRTNTIAYNEMLMHDTFKIQHLLIGSALMSVFFHHKFTFLELAWSFSVWLESVAILPQLYMLSKGGKTRSLTVHYIFAMGLYRALY 168 The following BLAST results are available for this feature:
BLAST of FC925466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925466 ID=FC925466; Name=FC925466; organism=Citrus clementina; type=EST; length=655bpback to top |