FC925490

Overview
NameFC925490
Unique NameFC925490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1996 contig Ccv1_Contig1996:1..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MPK10_ARATH (Mitogen-activated protein kinase 10 OS=Arabidopsis thaliana GN=MPK10 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24
Identity = 60/171 (35.09%), Postives = 98/171 (57.31%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHK--RMPPEALDLVSRLLQYSPSLRCTALEACAHPF---FDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPE 504
            +  +R+YRAPEL+ G+++YT AID+WS+GC+  E++  +PLFPG+  V+QL  +++++GTP+ EE+  ++  Y +    Q+   P      K   +PP A+DLV ++L + P  R +  EA AHP+   F D+ D   C     P    FNF   E   +  + R+ +  E
Sbjct:  220 YVVTRWYRAPELLLGSSDYTAAIDVWSVGCIFMEIMNREPLFPGKDQVNQLRLLLELIGTPSEEELGSLS-EYAKRYIRQLPTLPRQSFTEKFPNVPPLAIDLVEKMLTFDPKQRISVKEALAHPYLSSFHDITDEPEC---SEP----FNFDLDEHPFSEEQFRELIYCE 382          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 9.819e-24
Identity = 52/136 (38.24%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 402
            +  +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY     P     PW+++F     P+ALDL+ ++L ++P  R     A AHP+ +   DP+
Sbjct:  190 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADPKALDLLDKMLTFNPHKRIEVEAALAHPYLEQYYDPS 323          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.675e-23
Identity = 66/173 (38.15%), Postives = 95/173 (54.91%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE---IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLP-TLFNFTAQELAGASNELRQRLIPEHAR 513
            +  +R+YRAPE++    EYT AID+WS+GC+LAE+L G+PLFPG+    QL  I+ +LGTPT E+   IK           P  K  P+  +F K     ALDL+ +LL ++P  R T  EA  HP+ +   DP    P   P+P   F+F   +   +  +L+Q +  E  R
Sbjct:  185 YVATRWYRAPEIMLTFKEYTKAIDVWSVGCILAEMLSGKPLFPGKDYHHQLTLILDVLGTPTMEDYYGIKSRRAREYIRSLPFKKKVPFRTLFPK-TSDLALDLLEKLLAFNPVKRITVEEALKHPYLEPYHDPED-EPTAPPIPEEFFDFDKHKDNLSKEQLKQLIYQEIMR 355          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MAPK2_PNECA (Mitogen-activated protein kinase 2 OS=Pneumocystis carinii GN=MKP2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 65/164 (39.63%), Postives = 96/164 (58.54%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREE---IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPL-PTLFNFTAQELAGASNELR 486
            +  +R+YRAPE++    EYT AID+WS+GC+LAE+L G+PLFPG+    QL+ I+ +LGTPT E+   IK           P  K   +  IF  R  P ALDL+ +LL ++P+ R TA EA  H + +   DP+   P   P+ P+ F+F   + +   N+L+
Sbjct:  178 YVATRWYRAPEIMLTFKEYTKAIDIWSVGCILAEMLSGRPLFPGKDYHHQLMLILDVLGTPTMEDYYGIKSRRAREYIRSLPFKKRVSFASIF-PRANPLALDLLEKLLAFNPAKRVTAEEALQHNYLEPYHDPDD-EPTAPPISPSFFDFDRIKDSLTKNDLK 339          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.187e-23
Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 1
Query:   22 YYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDL 390
            +YRAPE++ G+  Y+  +DMWS+GC+  E+L  +PLF G+  +DQ+  I ++LGTP       +   P Y    FP     P++KIF  R  P ALDL++++LQY PS R +A EA  HP+F DL
Sbjct:  169 WYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSIWPGVTKLPEYVS-TFPNWPGQPYNKIF-PRCEPLALDLIAKMLQYEPSKRISAKEALLHPYFGDL 291          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23
Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1
Query:   22 YYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMN--PNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 402
            +YRAP+++ G+ +Y+T ID+WS GC+ AE+  G+PLFPG    DQL  I KILGTP  E    +   P Y +  FP   AH    I H  +  + L+L+S++LQY P+ R TA  A  HP+FD L   N
Sbjct:  166 WYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESWPSITELPEY-KTDFPVHPAHQLSSIVH-GLDEKGLNLLSKMLQYDPNQRITAAAALKHPYFDGLEPIN 292          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MK01_RAT (Mitogen-activated protein kinase 1 OS=Rattus norvegicus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23
Identity = 51/136 (37.50%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 402
            +  +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY     P     PW+++F      +ALDL+ ++L ++P  R    +A AHP+ +   DP+
Sbjct:  185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 318          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MK01_MOUSE (Mitogen-activated protein kinase 1 OS=Mus musculus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23
Identity = 51/136 (37.50%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 402
            +  +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY     P     PW+++F      +ALDL+ ++L ++P  R    +A AHP+ +   DP+
Sbjct:  185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 318          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MK01_HUMAN (Mitogen-activated protein kinase 1 OS=Homo sapiens GN=MAPK1 PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23
Identity = 51/136 (37.50%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 402
            +  +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY     P     PW+++F      +ALDL+ ++L ++P  R    +A AHP+ +   DP+
Sbjct:  187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 320          
BLAST of FC925490 vs. ExPASy Swiss-Prot
Match: MK01_BOVIN (Mitogen-activated protein kinase 1 OS=Bos taurus GN=MAPK1 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.731e-23
Identity = 51/136 (37.50%), Postives = 86/136 (63.24%), Query Frame = 1
Query:    7 FFCSRYYRAPELIFGATEYTTAIDMWSIGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCM----NPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPN 402
            +  +R+YRAPE++  +  YT +ID+WS+GC+LAE+L  +P+FPG+  +DQL  I+ ILG+P++E++ C+      NY     P     PW+++F      +ALDL+ ++L ++P  R    +A AHP+ +   DP+
Sbjct:  187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 320          
The following BLAST results are available for this feature:
BLAST of FC925490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK10_ARATH7.518e-2435.09Mitogen-activated protein kinase 10 OS=Arabidopsis... [more]
MK01_XENLA9.819e-2438.24Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]
MAPK_FUSSO1.675e-2338.15Mitogen-activated protein kinase OS=Fusarium solan... [more]
MAPK2_PNECA2.187e-2339.63Mitogen-activated protein kinase 2 OS=Pneumocystis... [more]
CDC2_DICDI2.187e-2343.20Cell division control protein 2 homolog OS=Dictyos... [more]
CDK5_DICDI2.857e-2344.19Cell division protein kinase 5 homolog OS=Dictyost... [more]
MK01_RAT3.731e-2337.50Mitogen-activated protein kinase 1 OS=Rattus norve... [more]
MK01_MOUSE3.731e-2337.50Mitogen-activated protein kinase 1 OS=Mus musculus... [more]
MK01_HUMAN3.731e-2337.50Mitogen-activated protein kinase 1 OS=Homo sapiens... [more]
MK01_BOVIN3.731e-2337.50Mitogen-activated protein kinase 1 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YJ02FM1 TF Citrus clementina cDNA clone KN0AAP3YJ02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925490 ID=FC925490; Name=FC925490; organism=Citrus clementina; type=EST; length=750bp
ATATCGTTTTTCTGCTCAAGATATTACAGGGCCCCGGAACTTATATTTGG
GGCTACAGAATACACAACTGCCATTGATATGTGGTCCATTGGATGTGTCT
TGGCTGAGCTTCTTCTTGGACAGCCTTTATTTCCTGGGGAAAGTGGAGTT
GACCAGCTCGTCGAAATCATTAAGATTCTGGGAACACCAACAAGAGAAGA
AATTAAGTGCATGAATCCAAATTACACAGAATTTAAGTTCCCTCAAATTA
AAGCTCATCCATGGCATAAGATATTTCACAAACGAATGCCCCCTGAAGCA
CTGGATCTTGTCTCAAGGTTGCTTCAGTATTCACCAAGCCTACGATGCAC
TGCTTTGGAGGCATGTGCACACCCCTTCTTTGATGATTTGAGAGACCCCA
ATACTTGTTTGCCAAATGGGCGACCCCTACCTACTCTTTTCAATTTCACT
GCTCAAGAATTGGCTGGTGCCTCTAATGAATTGCGACAACGTCTTATCCC
GGAGCACGCAAGGAAATGATTTGATGACTGAGATGGATCCATATGCAATA
TAAATCAATTTTTGGATGCTTAGGTATGCCACAAGCCATTGTTGCCCTAC
AGGGCAACCGATTTTTTTCCCCTTCACCAATGAGTTGGTTCGTGGCTGGG
AGGCTGCTCAAGGATTTTTATGATGAATCCGCTGATGGGAGTGAGTTGTG
GATGGAAAAAGGTTTGACATTTATTTTCCAATTACCAATGTTTAATTTGT
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