FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.398e-46 Identity = 91/178 (51.12%), Postives = 123/178 (69.10%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +S+ AL+ D FA RH DQ M E +G + +LIDA +PK+IR +++ F + +E++ + +++LA N+V++S+IG GYYN H P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ MI DLTGL +SNASLLDE TAAAEAM + + K K F +A + Sbjct: 15 LSLAALEVHDAFAERHIGPDAADQHAMLEALGFASRAALIDAVIPKTIRRTETLPLGPFTQPKSEAEALAALRELADKNQVFRSYIGQGYYNAHTPTVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMIVDLTGLAISNASLLDEATAAAEAMTLLQRVGKPKSNVFFVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_AGRT5 (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcvP PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.398e-46 Identity = 93/171 (54.39%), Postives = 120/171 (70.18%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +P D RRH +P + A+M ++VG +LD+LIDATVP SIR + LTE + ++ +++ A+ N+V S IG GYY T PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ DLTGL ++NASLLDE TAAAEAMAMC + K K F + +N Sbjct: 13 QPYDFANRRHIGPSPSEMAEMLKVVGYKSLDALIDATVPSSIR--QKVPLTWGAALTEREALDRLRETANKNQVLTSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMCQRVAKSKATAFFVDAN 181
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RALEJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia eutropha (strain JMP134) GN=gcvP PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45 Identity = 92/173 (53.18%), Postives = 118/173 (68.21%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRI-DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 L+ D FA RH +Q M +++G D+ +LIDA +P++IR D M +F E L E + ++KLA NKV KSFIG GYYNT P V+LRNI ENPAWYT YTPYQ EI+QGRLE++LNFQ M+ DLTGL ++NAS+LDEGTAAAEAM + + K TF +A + Sbjct: 20 LEARDAFAARHIGPDTPEQQHMLKVLGYDSRAALIDAVIPEAIRRRDGMPMGEFTEPLPEEAALAKLRKLAGKNKVLKSFIGQGYYNTLTPAVVLRNIFENPAWYTAYTPYQPEISQGRLEAMLNFQQMVTDLTGLDIANASMLDEGTAAAEAMTLLQRVNKHASNTFYVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.091e-45 Identity = 92/178 (51.69%), Postives = 122/178 (68.54%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +S+ AL+ D FA RH DQ M E +G + +LIDA +PK+IR + + F + +E++ + +++LA N+V++S+IG GYYN H P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ MI DLTGL +SNASLLDE TAAAEAM + I K K F +A + Sbjct: 15 LSLAALEVHDAFAERHIGPDSADQQAMLEALGFASRAALIDAVIPKTIRRTEPLPLGPFAQPKSEAEALATLRELADRNQVFRSYIGQGYYNAHTPTVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMIVDLTGLAISNASLLDEATAAAEAMTLLQRIGKPKSNVFYVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_DINSH (Glycine dehydrogenase [decarboxylating] OS=Dinoroseobacter shibae (strain DFL 12) GN=gcvP PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.431e-45 Identity = 94/179 (52.51%), Postives = 122/179 (68.16%), Query Frame = 3 Query: 309 GISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRI-DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 G S+ P D RRH +P++ +M +G+ +L++LI+ +P+ IR D + F L+E + M++LA N V S IG GY+ TH PPVILRNI+ENPAWYT YTPYQ EI+QGRLE+LLNFQTM+ADLTGLP++NASLLDEGTAAAEAMAM K K + F +A + Sbjct: 2 GFSLTDYAPYDFANRRHIGPSPKEMGQMLATLGVPSLEALINEALPEGIRRRDPLAFGP---ALSERDTLHRMRELADKNTVLTSLIGQGYHGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMMADLTGLPIANASLLDEGTAAAEAMAMAQRASKSKARGFFVAED 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_SYNY3 (Glycine dehydrogenase [decarboxylating] OS=Synechocystis sp. (strain PCC 6803) GN=gcvP PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.175e-45 Identity = 92/174 (52.87%), Postives = 119/174 (68.39%), Query Frame = 3 Query: 321 EALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 E L P+D+F RH +Q +M + +G D L LID VP +IR + + +E I ++ +AS N+V++S+IGMGYY+T PPVI RNI+ENP WYT YTPYQAEIAQGRLE+LLNFQTM+ DLTGL ++NASLLDEGTAAAEAMA+ + K K F +A + Sbjct: 25 EKLAPADSFLDRHLGPGETEQRQMLQTLGFDTLGDLIDQAVPPAIRFP--RSLQLPASQSEYGAIAQLKSIASKNQVFRSYIGMGYYDTITPPVIQRNILENPGWYTAYTPYQAEIAQGRLEALLNFQTMVMDLTGLEIANASLLDEGTAAAEAMALSYGVSKSKANAFFVAQD 196
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_HAHCH (Glycine dehydrogenase [decarboxylating] OS=Hahella chejuensis (strain KCTC 2396) GN=gcvP PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.416e-45 Identity = 95/183 (51.91%), Postives = 124/183 (67.76%), Query Frame = 3 Query: 297 SQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASN 842 S TR E L+ D F RH ++ M +G+ ++++LI TVP++IRI + + D TE+Q + ++ A NKV+K++IGMGYYNT P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQTMI DLTG+ M+NASLLDEGTAAAEAM MC + K K F +A + Sbjct: 2 SDTRETLAE-LEQRDAFIGRHIGPDEAEKTAMLNALGVADMETLISKTVPETIRIK--EGLELDGPCTEAQALAELKAFAERNKVFKTYIGMGYYNTLTPTVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQTMIGDLTGMEMANASLLDEGTAAAEAMTMCRRVNGKNKSNVFFVAED 181
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.416e-45 Identity = 89/178 (50.00%), Postives = 123/178 (69.10%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +S+ AL+ D FA RH Q M + +G +LIDA +P SIR +++ F + L+E++ + +++LA N+V++S+IG GYY+TH P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ M+ADLTGL +SNASLLDE TAAAEAM + + K + F +A + Sbjct: 15 LSLAALETHDAFAERHIGPDAASQQAMLDTLGFATRAALIDAVIPASIRRAETLPLGPFAQPLSEAEALAALRELADKNQVFRSYIGQGYYDTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVADLTGLEISNASLLDEATAAAEAMTLLQRVGKPQSNVFYVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_ROSDO (Glycine dehydrogenase [decarboxylating] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gcvP PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.074e-45 Identity = 88/167 (52.69%), Postives = 117/167 (70.06%), Query Frame = 3 Query: 333 PSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 P D RRH +P + +M E+ G NLD+L+D T+P +IR + F + ++E +++EH++++AS N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EI+QGRLE+LLNFQTM++DLTGL ++NASLLDE TA AEAM M + K K K F + Sbjct: 10 PYDFANRRHIGPSPAEMTQMLEVTGAANLDALMDDTLPAAIR--QKEPLAFGKAMSEREVLEHLRRVASKNQVLTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVSDLTGLEVANASLLDEATACAEAMTMAQRVSKSKSKAFFV 174
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_VIBVY (Glycine dehydrogenase [decarboxylating] OS=Vibrio vulnificus (strain YJ016) GN=gcvP PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.238e-45 Identity = 88/175 (50.29%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 318 VEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +++L F RHN DQ KM + ++LD+LI TVP IR++ K + E +E+ M+ ++K A +N+V ++FIG GYYNT P VILRN++ENP WYT YTPYQ EI+QGRLESLLN+Q M+ DLTG+ ++NASLLDE TAAAEAM +C K K K F +A + Sbjct: 5 LQSLNTQHEFVGRHNGPNHADQQKMLSTINAESLDALIAQTVPAQIRLE--KPMQLAEAQSEADMLASIKKFADLNQVKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEISQGRLESLLNYQQMVMDLTGMDIANASLLDEATAAAEAMTLCQRAGKSKSKVFFVADD 177 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |