FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHIE6 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CIAT 652) GN=gcvP PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.881e-43 Identity = 87/168 (51.79%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 +P D RRH +P + M +++G ++LD LIDAT+P +IR + + +TE + ++ +++ A+ NKV S IG GYY T PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ DLTGL ++NASLLDE TAAAE MAM + K K K F + Sbjct: 13 QPYDFANRRHIGPSPAEMTDMLKVIGFNSLDGLIDATLPPTIRQKAPLV--WGAPMTEREALDKLRETANKNKVLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEGMAMAERVSKSKAKAFFV 178
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_DEIRA (Glycine dehydrogenase [decarboxylating] OS=Deinococcus radiodurans GN=gcvP PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.881e-43 Identity = 88/177 (49.72%), Postives = 120/177 (67.80%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK-KKTFIIASN 842 S+ L ++ F RRH + +QA+M ++G+ +LD L T+P +I+ D + G+TE+Q + ++ +A NKV++S+IGMGY T VPPVILRN++ENP WYT YTPYQAEI+QGRLE LLNFQ + D+TG+P+SNASLLDE TAAAEAM + K K F +A N Sbjct: 4 SLSDLLQTNDFTRRHIGPSEAEQAEMLGVLGVSSLDELTQTTLPAAIQFDGELHT--GPGMTEAQALAELKAVAQKNKVFRSYIGMGYAGTDVPPVILRNMLENPGWYTAYTPYQAEISQGRLEMLLNFQQTVQDMTGMPVSNASLLDEATAAAEAMTLAKRQSKNKGSNVFFVADN 178
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BORPD (Glycine dehydrogenase [decarboxylating] OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvP PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.881e-43 Identity = 86/173 (49.71%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 324 ALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 AL P F RH T DQ KM +G +LD+L+ VP +IR S +ES ++ ++ +A N++Y+++IG GYY TH P V+LRN++ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ADLTGL +SNASLLDEGTAAAEAM + K + F ++++ Sbjct: 4 ALDPHTDFIPRHIGPTAADQEKMLAAIGCGSLDALLQEVVPPAIR--SQGPLALPASRSESDVLADLKAVAGRNRIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSKSASQVFFVSAH 174
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_AGRRK (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=gcvP PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.881e-43 Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 +P D RRH +P + A M +++G +LD LIDAT+P SIR + + +TE + ++ +++ A+ NKV S IG GYY T PPVI R I+ENPAWYT YTPYQ EI+QGRLE+LLN+QTMI DLTGL ++NASLLDE TAAAE MAM + K K K F + Sbjct: 13 QPYDFANRRHIGPSPSEMADMLKVIGYSSLDKLIDATLPPSIRQKAPLV--WGAPMTEREALDKLRETANKNKVLVSLIGQGYYGTITPPVIQRTILENPAWYTAYTPYQPEISQGRLEALLNYQTMICDLTGLDVANASLLDEATAAAEGMAMAERVAKSKAKAFFV 178
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_XANCP (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 S+ L+ F RH + A+M +VG D+LD++ DA VP +I+ S + +TE + + ++ +AS N+V ++FIG GYY TH P VILRNI+ENPAWYT YTPYQAEI+QGR+E+L+NFQTM ADLTG+ ++NASLLDE TAAAEAM + K K TF + Sbjct: 7 SLRDLEHHSAFVERHIGPNDAEIAQMLGVVGHDSLDAMTDAIVPSNIK--SPAALALPDAITEEEALARIRAIASKNQVQRTFIGQGYYGTHTPKVILRNILENPAWYTAYTPYQAEISQGRMEALINFQTMCADLTGMQIANASLLDEATAAAEAMTLAKRSAKSKSDTFFV 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_XANC8 (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 S+ L+ F RH + A+M +VG D+LD++ DA VP +I+ S + +TE + + ++ +AS N+V ++FIG GYY TH P VILRNI+ENPAWYT YTPYQAEI+QGR+E+L+NFQTM ADLTG+ ++NASLLDE TAAAEAM + K K TF + Sbjct: 7 SLRDLEHHSAFVERHIGPNDAEIAQMLGVVGHDSLDAMTDAIVPSNIK--SPAALALPDAITEEEALARIRAIASKNQVQRTFIGQGYYGTHTPKVILRNILENPAWYTAYTPYQAEISQGRMEALINFQTMCADLTGMQIANASLLDEATAAAEAMTLAKRSAKSKSDTFFV 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_VARPS (Glycine dehydrogenase [decarboxylating] OS=Variovorax paradoxus (strain S110) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 84/176 (47.73%), Postives = 119/176 (67.61%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 S++ L+ ++ F RH D+A+M ++G + LID VP +IR K + TE+ + ++ +A+ NKV++SFIG GYY TH P VILRN++ENPAWYT YTPYQAEI+QGR+E+LLNFQTM+ DLTG+ ++NAS+LDE TAAAEAM + K K F+++ + Sbjct: 8 SLQQLENAEEFLARHIGIDAADEARMLPVIGSETRAELIDGIVPAAIR--RAKPMRLPAPATEADALAELKAIAAKNKVFRSFIGQGYYGTHTPGVILRNVLENPAWYTAYTPYQAEISQGRMEALLNFQTMVCDLTGMAIANASMLDEATAAAEAMTLAKRSVKSKSNVFLVSGD 181
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 91/174 (52.30%), Postives = 121/174 (69.54%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI--QKGKKKTFIIASN 842 L+ F RH TP D KM L+G +L LI+A +P IR+ + EGL+E+ ++ ++ LA N+V++S+IGMGYYN P VI RNI+ENP WYTQYTPYQAEIAQGRLE+LLNFQT+++DLTGL ++NASLLDE TAAAEAM + N Q+G + F++A + Sbjct: 13 LETDAEFVARHIGITPSDLPKMLSLLGYGSLKELINAVIPPEIRLQ--RPLALSEGLSETAALQKLRTLAQQNQVWRSYIGMGYYNCITPSVIQRNILENPGWYTQYTPYQAEIAQGRLEALLNFQTLVSDLTGLAIANASLLDEATAAAEAMTLSFNACRQRGANR-FLVAQD 183
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_STRGG (Glycine dehydrogenase [decarboxylating] OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = 3 Query: 306 RGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 R + L+ F +RH E QAKM VG +LD L A VP I+ S + TE++++ ++ LA N+V IG+GYY T PPVILRN+MENPAWYT YTPYQ EI+QGRLE+LLNFQTM+A+LTGLP S ASLLDEGTAAAEAMA+ + K KK F++ Sbjct: 4 RRTPLSQLEQGIPFEQRHIGPDAEAQAKMLAQVGYGSLDELTAAAVPDVIK--SAEALNLPSARTEAEVLAELRSLADRNQVLAPMIGLGYYGTFTPPVILRNVMENPAWYTAYTPYQPEISQGRLEALLNFQTMVAELTGLPTSGASLLDEGTAAAEAMALSRRVGKVKKGVFLV 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHIL3 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 88/168 (52.38%), Postives = 116/168 (69.05%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 +P D RRH +P + M +++G ++LD LIDAT+P SIR + + +TE + ++ +++ A+ NKV S IG GYY T PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLN+QTMI DLTGL ++NASLLDE TAAAE MA+ + K K K F + Sbjct: 13 QPYDFANRRHIGPSPAEMTDMLKVIGYNSLDGLIDATLPPSIRQKAPLV--WGAPMTEREALDKLRETANKNKVLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMICDLTGLDVANASLLDEATAAAEGMAIAERVAKSKAKAFFV 178 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |