FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PSYIN (Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii (strain 37) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 87/173 (50.29%), Postives = 115/173 (66.47%), Query Frame = 3 Query: 318 VEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA 836 ++ L S FA RHN + Q KM E +G+ +++ LID TVP +IR+ K E +ES + ++ +A N V +SFIG GYYNT +P VILRN++ENP WYT YTPYQ EI+QGRLESLLN+Q M+ DLT + ++NASLLDE TAAAE+M +C K K F +A Sbjct: 7 LDLLSDSKEFATRHNGSGAAQQKKMLETIGVQSIEQLIDQTVPAAIRLPEKM--KLAEPQSESMTLASLKAIAEKNIVNRSFIGQGYYNTLLPNVILRNVLENPGWYTAYTPYQPEISQGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAESMTLCKRAGKSKSLAFFVA 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PSESM (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. tomato GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 85/172 (49.42%), Postives = 118/172 (68.60%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 L ++ F RH D+ M +G D++++L D+ +P+SI+ S+ G +E+ + ++ +AS N+++K++IG GYYNTH P ILRN++ENPAWYT YTPYQ EI+QGRLESLLNFQT+I+DLTGLP++NASLLDE TAAAEAM C + K K AS+ Sbjct: 7 LTTANEFIARHIGPRAADELAMLHTLGFDSIEALSDSVIPESIKGTSVL--NLPAGQSEADALASIKAIASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQGRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSQQFFASS 176
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PSEHT (Glycine dehydrogenase [decarboxylating] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 90/177 (50.85%), Postives = 119/177 (67.23%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASN 842 S+E L+ + F RRH +P + M + + +++ LI TVP IR++ E TE + + +++ +AS NKV+KS+IG GY+ THVP VILRN++ENP WYT YTPYQ EIAQGRLESLLNFQTM DLTGL +++ASLLDE TAAAEAM + + K KK F IA + Sbjct: 6 SLEQLEQTQDFIRRHIGPSPAQVSDMLSALEVSSVEELIGQTVPAGIRLEQPL--TVGESRTEVETLSYLKSVASKNKVFKSYIGQGYHPTHVPHVILRNVLENPGWYTAYTPYQPEIAQGRLESLLNFQTMTLDLTGLDLASASLLDESTAAAEAMGLAKRVSKAKKANAFFIADD 180
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 87/178 (48.88%), Postives = 120/178 (67.42%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +S+ AL+ D FA RH Q M + +G + +LIDA +P SIR +++ F + +E++ + ++ LA N+V++S+IG GY++TH P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ M+ADLTGL +SNASLLDE TAAAEAM + K F +A + Sbjct: 15 LSLAALETHDAFAERHIGPDAASQQAMLDTLGFASRAALIDAVIPASIRRAETLPLGPFAQPKSEAEALAALRALADKNQVFRSYIGQGYHDTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPASNVFYVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BURA4 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain MC40-6) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.621e-43 Identity = 87/178 (48.88%), Postives = 120/178 (67.42%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +S+ AL+ D FA RH Q M + +G + +LIDA +P SIR +++ F + +E++ + ++ LA N+V++S+IG GY++TH P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ M+ADLTGL +SNASLLDE TAAAEAM + K F +A + Sbjct: 15 LSLAALETHDAFAERHIGPDAASQQAMLDTLGFASRAALIDAVIPASIRRAETLPLGPFAQPKSEAEALAALRALADKNQVFRSYIGQGYHDTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPASNVFYVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_VIBCM (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 85/175 (48.57%), Postives = 117/175 (66.86%), Query Frame = 3 Query: 318 VEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 + +L + F RHN ++QA M + V ++LD+LI TVP IR+++ + +E+ M+ M+ A +N++ ++FIG GYYNT P VILRN+MENP WYT YTPYQ EI+QGRLESLLN+Q M+ DLT + ++NASLLDE TAAAEAMA+C K K F +A + Sbjct: 5 LHSLSTQNEFVARHNGPDKQEQATMLKTVNAESLDALIAQTVPAQIRLEAPM--QLAPAQSEADMLATMKSFAKLNQLKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEISQGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALCQRAGKSKSNLFFVADD 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_VIBC3 (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 85/175 (48.57%), Postives = 117/175 (66.86%), Query Frame = 3 Query: 318 VEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 + +L + F RHN ++QA M + V ++LD+LI TVP IR+++ + +E+ M+ M+ A +N++ ++FIG GYYNT P VILRN+MENP WYT YTPYQ EI+QGRLESLLN+Q M+ DLT + ++NASLLDE TAAAEAMA+C K K F +A + Sbjct: 5 LHSLSTQNEFVARHNGPDKQEQATMLKTVNAESLDALIAQTVPAQIRLEAPM--QLAPAQSEADMLATMKSFAKLNQLKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEISQGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALCQRAGKSKSNLFFVADD 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHOSK (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 88/162 (54.32%), Postives = 113/162 (69.75%), Query Frame = 3 Query: 351 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG-LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 RRH +P + +M +VG+ +LD LI+ TVP SIR ++ D L E +++ M+++A+ N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EIAQGRLE+LLN+QTM+ADLTGLP++NASLLDE TAAAEAM M K K + F + Sbjct: 16 RRHIGPSPSEMEEMLRVVGVSSLDQLIEETVPASIRQET----PLDWAPLAEHELLARMREVAAKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMTMAERASKSKARAFFV 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS4 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 88/162 (54.32%), Postives = 113/162 (69.75%), Query Frame = 3 Query: 351 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG-LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 RRH +P + +M +VG+ +LD LI+ TVP SIR ++ D L E +++ M+++A+ N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EIAQGRLE+LLN+QTM+ADLTGLP++NASLLDE TAAAEAM M K K + F + Sbjct: 16 RRHIGPSPSEMEEMLRVVGVSSLDQLIEETVPASIRQET----PLDWAPLAEHELLARMREVAAKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMTMAERASKSKARAFFV 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHIME (Glycine dehydrogenase [decarboxylating] OS=Rhizobium meliloti GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 90/171 (52.63%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 KP D RRH +P + +M ++VG +LD+LID TVP SIR + + +TE + ++ +++ A+ N+ S IG GYY T PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ DLTGL ++NASLLDE TAAAEAMA+ + K K K F I N Sbjct: 13 KPYDFANRRHIGPSPAEMDEMLKVVGYPSLDALIDDTVPPSIRQRTPL--AWGAPMTEREALDKLRETANRNRKLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAIAERVAKSKAKAFFIDEN 181 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |