FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU2 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 84/172 (48.84%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 L ++ F RH D+ M + +G D++++L ++ +P+SI+ S+ G +E+ + ++ +AS N+++K++IG GYYNTH P ILRN++ENPAWYT YTPYQ EI+QGRLESLLNFQT+I+DLTGLP++NASLLDE TAAAEAM C + K K AS+ Sbjct: 7 LTTANEFIARHIGPRAADELAMLQTLGFDSIEALSESVIPESIKGTSVL--NLPAGQSEADALASIKAIASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQGRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKASQQFFASS 176
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PSEFS (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas fluorescens (strain SBW25) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 84/171 (49.12%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIAS 839 L ++ F RH ED+ M +G D+L++L + +P+SI+ S+ ++GL+E++ + ++ +A N+++K++IG GYYN H P ILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQT+I+DLTGLP++NASLLDE TAAAEAM C + K K AS Sbjct: 5 LTTANEFIARHIGPRQEDEQHMLASLGFDSLEALSASVIPESIKGTSVL--GLEDGLSEAEALAKIKAIAGQNQLFKTYIGQGYYNCHTPSPILRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSNAFFAS 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.647e-43 Identity = 87/178 (48.88%), Postives = 120/178 (67.42%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIR-IDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 +S+ AL+ D FA RH Q M + +G + +LIDA +P SIR +++ F + +E++ + ++ LA N+V++S+IG GY++TH P VILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQ M+ADLTGL +SNASLLDE TAAAEAM + K F +A + Sbjct: 15 LSLAALETHDAFAERHIGPDAASQQAMLDTLGFASRAALIDAVIPASIRRAETLPLGPFAQPKSEAEALAALRVLADKNEVFRSYIGQGYHDTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVADLTGLAISNASLLDEATAAAEAMTLLQRTGKPTSNVFYVADD 192
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_SACD2 (Glycine dehydrogenase [decarboxylating] OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-42 Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 3 Query: 303 TRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTF 827 + G S++ L S F RH + M + +GLD++D LID TVP SIR + + + E Q + ++ +A N+ +KS+IGMGY+ T+VPPVILRN++ENP WYT YTPYQ EIAQGRLE LLNFQ MI +LTG+ M+NAS+LDE TAAAEAMAM + +K K TF Sbjct: 2 SHGTSLDELFNSRDFIGRHIGPNADQTRAMLDAMGLDSIDQLIDLTVPASIRGEETR--ALAAPVNEQQALAELKNIAGNNQRFKSYIGMGYHPTYVPPVILRNVLENPGWYTAYTPYQPEIAQGRLEGLLNFQQMIIELTGMDMANASMLDEATAAAEAMAMAKRVARKNKSNTF 175
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS1 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-42 Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 3 Query: 351 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG-LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 RRH +P + +M +VG+ +LD LI+ TVP SIR ++ D L E +++ M+++A N+V S IG GYY T PP I RNI+ENPAWYT YTPYQ EIAQGRLE+LLN+QTM+ADLTGLP++NASLLDE TAAAEAM M K K + F + Sbjct: 16 RRHIGPSPSEMEEMLRVVGVSSLDQLIEETVPASIRQET----PLDWAPLAEHELLARMREVAGKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMVADLTGLPVANASLLDEATAAAEAMTMAERASKSKARAFFV 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RALSO (Glycine dehydrogenase [decarboxylating] OS=Ralstonia solanacearum GN=gcvP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-42 Identity = 85/173 (49.13%), Postives = 115/173 (66.47%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRI-DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 L+ D FA RH +P++QA M +G + +LIDA +P +IR D M +F + LTE + ++ +A N+V +S IG GYY TH P VILRNI+ENPAWYT YTPYQ EI+QGRLE++LNFQ M+ DLT + ++NAS+LDE TAAAEAM + + K F +A + Sbjct: 24 LEARDAFAERHIGPSPDEQAAMLATLGYASRAALIDAVIPPAIRRQDGMPLGEFTQPLTEEAALAKLRGIAGQNRVVRSLIGQGYYGTHTPGVILRNILENPAWYTAYTPYQPEISQGRLEAMLNFQQMVMDLTAMDIANASMLDEATAAAEAMTLLQRVGKHPSNVFFVADD 196
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_PSE14 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-42 Identity = 84/172 (48.84%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 L ++ F RH D+ M + +G D++++L ++ +P+SI+ S+ G +E+ + ++ +AS N+++K++IG GYYNTH P ILRN++ENPAWYT YTPYQ EI+QGRLESLLNFQT+I+DLTGLP++NASLLDE TAAAEAM C + K K AS+ Sbjct: 7 LTTANEFIARHIGPRAADEQAMLQTLGFDSIEALSESVIPESIKGTSVL--NLPAGQSEADALASIKAIASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQGRLESLLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKGSQQFFASS 176
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BORA1 (Glycine dehydrogenase [decarboxylating] OS=Bordetella avium (strain 197N) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-42 Identity = 85/173 (49.13%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 324 ALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 AL F RH + DQAKM +G +LD+L++ VP IR + +E ++ ++++A+ NKV++++IG GYY TH P V+LRN++ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ADLTGL +SNASLLDEGTAAAEAM + K K F ++ + Sbjct: 4 ALDTHSDFIPRHIGPSEADQAKMLATIGCSSLDALLEEVVPPRIRNQAPL--ALPGARSEPDVLAELKQMAARNKVFRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRSAKSKSAVFFVSQH 174
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RHOP5 (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris (strain BisA53) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.475e-42 Identity = 89/163 (54.60%), Postives = 112/163 (68.71%), Query Frame = 3 Query: 345 FARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 FARRH +P++ A M VG +LD+L+ T+P +IR K L+E + + HM +LA+ N+V+ S IG GYY T +P VI RNI+ENPAWYT YTPYQ EI+QGRLE+L NFQTMI DLTGL ++NASLLDEGTAAAEAMA+ K K F + Sbjct: 15 FARRHIGPSPQEIAAMLRAVGAPSLDALMGETLPAAIR--QAKPLDLGPALSEPEALAHMAELAAKNQVFTSLIGQGYYGTAMPTVIQRNILENPAWYTAYTPYQPEISQGRLEALFNFQTMICDLTGLDVANASLLDEGTAAAEAMALAERAMPKKTKAFFV 175
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_RALPJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia pickettii (strain 12J) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.475e-42 Identity = 86/173 (49.71%), Postives = 114/173 (65.90%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRI-DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 L+ D FA RH + ++Q M +G + +LIDA +P +IR D M +F + LTE + ++ +A N+V KS IG GYY TH P VILRNI+ENPAWYT YTPYQ EI+QGRLE++LNFQ M+ DLT + ++NAS+LDE TAAAEAM + I K K F +A + Sbjct: 21 LEARDAFAHRHIGPSADEQTAMLGTLGYTSRAALIDAVIPPAIRRQDGMPLGEFTQPLTEEAALAKLRGIAGQNRVVKSLIGQGYYGTHTPGVILRNILENPAWYTAYTPYQPEISQGRLEAMLNFQQMVIDLTAMDIANASMLDEATAAAEAMTLLQRIGKSKSTVFFVADD 193 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |