FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPK (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas putida (strain KT2440) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.475e-42 Identity = 86/171 (50.29%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIAS 839 L ++ F RH D+ M +G D+LD++ A +P SI+ S+ S +G +E+ + ++ +A N+++KS+IG GYYNTH P ILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQT+I+DLTGLP++NASLLDE TAAAEAM C + K K AS Sbjct: 5 LGTANEFIARHIGPRAADEQAMLTALGFDSLDAMTAAVIPDSIKGTSVLGSH--DGQSEADALAALKAIAGKNQLFKSYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTLISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKSSHAFFAS 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_HUMAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42 Identity = 85/168 (50.60%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 318 VEALKPS-DTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 818 +E L P D FARRH +DQ +M + +GL ++D LI+ TVP +IR+ + K ++ + E++++ + ++S N++++S+IGMGYYN VP ILRN++EN W TQYTPYQ E++QGRLESLLN+QTM+ D+TGL M+NASLLDEGTAAAEA+ +C K +K Sbjct: 53 LERLLPRHDDFARRHIGPGDKDQREMLQTLGLASIDELIEKTVPANIRLK--RPLKMEDPVCENEILATLHAISSKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWITQYTPYQPEVSQGRLESLLNYQTMVCDITGLDMANASLLDEGTAAAEALQLCYRHNKRRK 218
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_GRAFK (Glycine dehydrogenase [decarboxylating] OS=Gramella forsetii (strain KT0803) GN=gcvP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42 Identity = 82/162 (50.62%), Postives = 121/162 (74.69%), Query Frame = 3 Query: 336 SDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK 821 +D+FA RH E+ +M + +G+++++ LI T+P IR+D + ++E+Q EH++KL+ N+V+K++IG+GY+ +P VI RNI+ENP WYT YTPYQAEIAQGRLE+LLNFQTM++DLTG+ ++NASLLDE TAAAEAMA+ + ++ K+K Sbjct: 3 TDSFALRHIGPKAENLQEMLDTIGVESIEQLIYETIPDDIRLDQPL--NLPKAMSENQYAEHIKKLSEKNRVFKTYIGLGYHQAILPAVIQRNILENPGWYTAYTPYQAEIAQGRLEALLNFQTMVSDLTGMEIANASLLDESTAAAEAMALLHAVRDRKQK 162
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_GLUOX (Glycine dehydrogenase [decarboxylating] OS=Gluconobacter oxydans GN=gcvP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42 Identity = 91/180 (50.56%), Postives = 119/180 (66.11%), Query Frame = 3 Query: 312 ISVEALKPSDT--FARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEG----LTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 + V L P+ T F+ RH P + +M +VG +LD LID T+P +I + D G LTE + ++++AS N+V S IG GYY+T +PPVI RNI+ENPAWYT YTPYQ EI+QGRLE+LLNFQT++ADLTGL ++NASLLDEGTA AEAMA+ + K K F + Sbjct: 5 LPVTTLWPAQTEDFSSRHIGPRPSEIGEMLRVVGASSLDDLIDKTIPAAI------LDRGDHGIGAALTEQDALARLRQIASRNQVLTSMIGQGYYDTVLPPVIQRNILENPAWYTAYTPYQPEISQGRLEALLNFQTLVADLTGLDIANASLLDEGTACAEAMALAQRVGKSKATAFFV 178
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BORPA (Glycine dehydrogenase [decarboxylating] OS=Bordetella parapertussis GN=gcvP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42 Identity = 83/166 (50.00%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 345 FARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 F RH + EDQA M +G +LD+LID VP IR S +E+ +++ ++++A+ N++Y+++IG GYY TH P V+LRN++ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ADLTGL +SNASLLDEGTAAAEAM + + F ++ + Sbjct: 11 FIPRHIGPSDEDQATMLAAIGAASLDALIDEVVPPRIR--SRAPLALPAARSETDVLQDLKRMAARNQIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQH 174
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BORBR (Glycine dehydrogenase [decarboxylating] OS=Bordetella bronchiseptica GN=gcvP PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.926e-42 Identity = 83/166 (50.00%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 345 FARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 F RH + EDQA M +G +LD+LID VP IR S +E+ +++ ++++A+ N++Y+++IG GYY TH P V+LRN++ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ADLTGL +SNASLLDEGTAAAEAM + + F ++ + Sbjct: 11 FIPRHIGPSDEDQATMLAAIGAASLDALIDEVVPPRIR--SRAPLALPAARSETDVLQDLKRMAARNQIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQH 174
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BORPE (Glycine dehydrogenase [decarboxylating] OS=Bordetella pertussis GN=gcvP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.516e-42 Identity = 83/166 (50.00%), Postives = 115/166 (69.28%), Query Frame = 3 Query: 345 FARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 F RH + EDQA M +G +LD+LID VP IR S +E+ +++ ++++A+ N++Y+++IG GYY TH P V+LRN++ENPAWYT YTPYQ EI+QGRLE+LLN+QTM+ADLTGL +SNASLLDEGTAAAEAM + + F ++ + Sbjct: 11 FIPRHIGPSDEDQATMLVAIGAASLDALIDEVVPPRIR--SRAPLALPAARSETDVLQDLKRIAARNQIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSRSSSPVFFVSQH 174
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEF5 (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.516e-42 Identity = 84/171 (49.12%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 327 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIAS 839 L ++ F RH D+ M +G D+L++L + +P+SI+ S+ + GL+E+Q + ++ +A+ N+++K++IG GYYN H P ILRN++ENPAWYT YTPYQ EI+QGRLE+LLNFQT+I+DL+GLP++NASLLDEGTAAAEAM C + K K AS Sbjct: 5 LSTANEFIARHIGPRQGDEQAMLNSLGFDSLEALSASVIPESIKGTSVL--ELGHGLSEAQALASIKAIAARNQLFKTYIGQGYYNCHTPSPILRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTLISDLSGLPIANASLLDEGTAAAEAMTFCKRLSKNKGSHAFFAS 173
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_XANAC (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas axonopodis pv. citri GN=gcvP PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.286e-42 Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 S+ L+ F RH + A+M ++VG +LD+L DA VP +I+ S E +TE + + ++ +AS N+V ++FIG GYY TH P VILRNI+ENPAWYT YTPYQAEI+QGR+E+L+NFQT+ ADLTG+ ++NASLLDE TAAAEAM + K K TF + Sbjct: 7 SLRDLEHHSAFVERHIGPNDAEIAQMLDVVGHASLDALTDAIVPGNIK--SPAPLALPEAITEEEALAKIRAIASKNQVQRNFIGQGYYGTHTPKVILRNILENPAWYTAYTPYQAEISQGRMEALINFQTLCADLTGMQIANASLLDEATAAAEAMTLAKRSAKSKSNTFFV 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42 Identity = 88/168 (52.38%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 333 PSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK--KKTFI 830 P DTF RRH + A+M + +GL +++ LID VP IR+ K + TE +++++++ +AS N+V++S+IG GY++ +P VI RNI+ENP WYT YTPYQAEI+QGRLE+LLNFQTMI DLTGL +SNASLLDEGTAAAEAM + +++K + KK F+ Sbjct: 20 PLDTFPRRHIGPNLQQTAEMLKELGLSSVEELIDKAVPVGIRLK--KSLDLPKASTEHKILQNLKGIASQNQVFRSYIGAGYHSCIIPGVIQRNILENPGWYTAYTPYQAEISQGRLEALLNFQTMIIDLTGLEISNASLLDEGTAAAEAMFLAYSVRKNETAKKFFV 185 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |