FC925573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain SDF) GN=clpX PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.266e-30 Identity = 61/95 (64.21%), Postives = 81/95 (85.26%), Query Frame = 1 Query: 241 QVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 Q +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQR 260
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_ACIBC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain ACICU) GN=clpX PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.266e-30 Identity = 61/95 (64.21%), Postives = 81/95 (85.26%), Query Frame = 1 Query: 241 QVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 Q +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQR 260
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB0057) GN=clpX PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.266e-30 Identity = 61/95 (64.21%), Postives = 81/95 (85.26%), Query Frame = 1 Query: 241 QVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 Q +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQR 260
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_ACIB3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acinetobacter baumannii (strain AB307-0294) GN=clpX PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.266e-30 Identity = 61/95 (64.21%), Postives = 81/95 (85.26%), Query Frame = 1 Query: 241 QVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 Q +DY+V AQ+GI+YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGTV ++P +G RKHP+ + IQIDT +ILFICGGAF +EK + +R Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQR 260
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_XYLFT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpX PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30 Identity = 62/103 (60.19%), Postives = 83/103 (80.58%), Query Frame = 1 Query: 250 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER*YQFRGYNFNV 558 DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G RKHP+ + +Q+DTK+ILFICGGAF ++K I +R + G F V Sbjct: 172 DYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCNEVGGIGFGV 274
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_XYLF2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Xylella fastidiosa (strain M23) GN=clpX PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30 Identity = 62/103 (60.19%), Postives = 83/103 (80.58%), Query Frame = 1 Query: 250 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER*YQFRGYNFNV 558 DY+V AQ GIVYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTV +VP +G RKHP+ + +Q+DTK+ILFICGGAF ++K I +R + G F V Sbjct: 172 DYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCNEVGGIGFGV 274
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_THEEB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermosynechococcus elongatus (strain BP-1) GN=clpX PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30 Identity = 64/105 (60.95%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 211 DCRSKIILVSQVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 D + ++ + Q ++ +V AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G RKHP D IQIDT +ILFICGGAFV +EKTI +R Sbjct: 175 DVENILLRLLQNANMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQGGRKHPYQDCIQIDTTNILFICGGAFVGLEKTIEQR 279
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_RHORT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=clpX PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30 Identity = 62/105 (59.05%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 211 DCRSKIILVSQVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 D + I+ + Q SDYNV AQ+GIVYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTV +VP +G RKHP+ + +Q+DT +ILFICGGAF +++ IS R Sbjct: 156 DVENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISAR 260
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_PROMP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpX PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30 Identity = 63/105 (60.00%), Postives = 82/105 (78.10%), Query Frame = 1 Query: 211 DCRSKIILVSQVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 D + ++ + Q S+ NV AQ+GI+YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G RKHP D IQIDT ILFICGGAF+ +E + +R Sbjct: 183 DVENILLRLLQKSEMNVDLAQKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGGRKHPNHDCIQIDTSQILFICGGAFIGLEDIVQKR 287
BLAST of FC925573 vs. ExPASy Swiss-Prot
Match: CLPX_BDEBA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bdellovibrio bacteriovorus GN=clpX PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.653e-30 Identity = 61/105 (58.10%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 211 DCRSKIILVSQVSDYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISER 525 D + ++ + Q SDY+V AQ+G++Y+DE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGTV N+P KG RKHP+ + IQ+DT +ILFI GGAFV ++K I +R Sbjct: 157 DVENVVLNLLQASDYDVEKAQKGVIYVDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANLPPKGGRKHPQQEFIQVDTTNILFIVGGAFVGLDKIIEQR 261 The following BLAST results are available for this feature:
BLAST of FC925573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925573 ID=FC925573; Name=FC925573; organism=Citrus clementina; type=EST; length=609bpback to top |