FC925596

Overview
NameFC925596
Unique NameFC925596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_ACTP2 (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=apt PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.674e-37
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IPD+PK GI+F+DIT+LL   +AF+ T+D  V  +KDK I+ V G E+RGFIFG P+ALA+G  FV +RKPKKLP  VIS+
Sbjct:    7 IKSSIKSIPDYPKAGIIFRDITSLLEVPEAFKATVDAIVAEFKDKGITKVVGTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQ 94          

HSP 2 Score: 71.633 bits (174), Expect = 2.674e-37
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y+LEYG+D +E+H+ +V+  +  L+VDDL+ATGGT+ A  +L+ R+G  V   A VI LP+L G+E L
Sbjct:   94 QSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWLPDLGGKERL 163          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_LEPBA (Adenine phosphoribosyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=apt PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.674e-37
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            + S IR IPD+PKPGI+F+DIT+LL+D + F+ TI +FVERY++  ++ +A I+ARGFI G  +A  +G  FVP+RK  KLPG  IS
Sbjct:    4 VKSKIRTIPDYPKPGILFRDITSLLIDPEGFQLTIGMFVERYQNAKLNKIAAIDARGFIPGAALAFQLGVGFVPIRKKGKLPGNTIS 90          

HSP 2 Score: 75.0998 bits (183), Expect = 2.674e-37
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 562
            G    E Y+LEYG D +E+H  A+  G++ LI+DDL+ATGGTL A+I+L++ +   + EC+ +I LP+L G
Sbjct:   86 GNTISESYALEYGVDHVEIHTDAIVPGDKVLIMDDLIATGGTLEASIKLIQNLKGQIHECSTIINLPDLGG 156          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_BRASO (Adenine phosphoribosyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=apt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.674e-37
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I + +R IPD+PKPGI+F+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +S
Sbjct:    7 IKNTVRTIPDYPKPGILFRDITTLLADARAFRRAVDELVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHKTVS 93          

HSP 2 Score: 81.6481 bits (200), Expect = 2.674e-37
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            Y+LEYG D MEMHV AVQ GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L
Sbjct:   96 YALEYGTDEMEMHVDAVQPGERVILVDDLIATGGTAEGAVKLLRQIGATVVAACFIIDLPDLGGAAKL 163          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_BRASB (Adenine phosphoribosyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=apt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.674e-37
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I + +R IPD+PKPGI+F+DITTLL D +AFR  +D  V  +    I  VAGIEARGFI G  +A  + A FVP+RK  KLP + +S
Sbjct:    7 IKNTVRTIPDYPKPGILFRDITTLLADARAFRRAVDELVHPWAGSKIDKVAGIEARGFILGGAVAHQLSAGFVPIRKKGKLPHKTVS 93          

HSP 2 Score: 81.6481 bits (200), Expect = 2.674e-37
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            Y+LEYG D MEMHV AVQ GER ++VDDL+ATGGT   A++LL ++G  VV    +I+LP+L G   L
Sbjct:   96 YALEYGTDEMEMHVDAVQPGERVILVDDLIATGGTAEGAVKLLRQIGATVVAACFIIDLPDLGGAAKL 163          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_NITEU (Adenine phosphoribosyltransferase OS=Nitrosomonas europaea GN=apt PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.676e-37
Identity = 48/86 (55.81%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I S IR IP +P  GIMF+DITTLL D    R TID  V+RY+ + I  V GIE+RGFI   P+A A+ A FVP+RK  KLP E I
Sbjct:    3 IKSRIRTIPHYPHEGIMFRDITTLLKDPAGLRSTIDGIVQRYQTEKIDKVVGIESRGFIIAAPVAYALSAGFVPVRKQGKLPAETI 88          

HSP 2 Score: 81.6481 bits (200), Expect = 2.676e-37
Identity = 35/72 (48.61%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            +Y LEYG D +E+HV A+  G+R L++DDL+ATGGT+ AAI+L++  G  V+EC  VI+LP++ G   L ++
Sbjct:   91 DYQLEYGYDKVEIHVDAIDKGDRVLLIDDLIATGGTMEAAIKLVQEAGGEVIECCFVIDLPDIGGSRRLRQQ 162          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_AGRT5 (Adenine phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=apt PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.483e-37
Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            +S+AIR IPD+PKPGI+F+DITTLL + +AFR  +D  V+ Y    I  +AG+EARGFI G  +A  + A FVP+RK  KLP
Sbjct:    8 LSAAIRSIPDYPKPGIIFRDITTLLGNPRAFRRAVDELVQPYAGTKIDKIAGMEARGFILGGAVAHQLSAGFVPIRKKGKLP 89          

HSP 2 Score: 84.7297 bits (208), Expect = 3.483e-37
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            YSLEYG D MEMHV AVQ GE+ ++VDDL+ATGGT   A++LL ++G  +V    VI+LP+L GR+ L
Sbjct:   97 YSLEYGVDEMEMHVDAVQPGEKVILVDDLIATGGTAEGAVKLLRQMGAEIVSACFVIDLPDLGGRKKL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_BRAJA (Adenine phosphoribosyltransferase OS=Bradyrhizobium japonicum GN=apt PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.484e-37
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            + +++R IPD+PKPGIMF+DITTLL D +AFR  +D  V  +    I  VAG+EARGFI G  +A  + A FVP+RK  KLP
Sbjct:    7 LKASVRTIPDYPKPGIMFRDITTLLADARAFRRAVDELVNPWAGNKIDKVAGMEARGFIIGGAVAHQLSAGFVPIRKKGKLP 88          

HSP 2 Score: 83.9593 bits (206), Expect = 3.484e-37
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            YSLEYG D MEMHV A+Q GER ++VDDL+ATGGT   A++LL ++G +VV    +I+LPEL G   L
Sbjct:   96 YSLEYGIDEMEMHVDAIQPGERVILVDDLIATGGTAEGAVKLLRQIGANVVAACFIIDLPELGGAAKL 163          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_PHOLL (Adenine phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=apt PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.535e-37
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I  IPD+PKPG++F+DITTLL +  A++ TIDL VERY+ K I+ + G EARGF+FG P+AL +G  F+P+RK  KLP E +S
Sbjct:   11 IKDSIETIPDYPKPGVLFRDITTLLDNPLAYQATIDLLVERYQGKGITKIVGTEARGFLFGAPVALRLGVGFIPVRKAGKLPRETLS 97          

HSP 2 Score: 70.4774 bits (171), Expect = 4.535e-37
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y+LEYG D +EMH  +V+  ++ L++DDL+ATGGT+ A +RL+ R+G  V E A +I L  L G E L
Sbjct:   98 ETYNLEYGTDTLEMHKDSVRENDKVLVIDDLLATGGTVEATVRLIRRLGGEVSEAAFIIGLLGLGGVERL 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_PASMU (Adenine phosphoribosyltransferase OS=Pasteurella multocida GN=apt PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.537e-37
Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 1
Query:   91 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            ++A I S+I+ IP+ PK GI+F+DIT+LL    AF+  +DLFV RYK+K I+ V G E+RGFIFG P+ALA+   FV +RKP KLP E IS+
Sbjct:    4 KLALIKSSIKSIPNHPKEGIIFRDITSLLEVPAAFQTVVDLFVTRYKEKGITKVLGTESRGFIFGAPVALALNVPFVLVRKPGKLPRETISQ 95          

HSP 2 Score: 73.9442 bits (180), Expect = 4.537e-37
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG+D +E+H  A+ A ++ LI+DDL+ATGGT+ A ++L++R+G  V + A VI LP+L G   L
Sbjct:   95 QTYQLEYGQDTLEIHTDAIHAQDKVLIIDDLLATGGTVEATVKLVQRLGGDVQDAAFVINLPDLGGEARL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_SHEFN (Adenine phosphoribosyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.537e-37
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            +A I  +I+ IPD+P PGIMF+D+T+LL + +A++ TI + V  Y+ K  + V G EARGF+FG P+AL +G  FVP+RKP KLP + IS+
Sbjct:    7 LALIKQSIKTIPDYPIPGIMFRDVTSLLENAEAYKATIAILVAHYQSKGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRKTISQ 97          

HSP 2 Score: 76.2554 bits (186), Expect = 4.537e-37
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYGKD +E+HV A+ A ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LPE+ G + L
Sbjct:   97 QTYDLEYGKDTLEIHVDAINANDKVLVIDDLLATGGTIEATVKLIRELGGEVSHAAFVISLPEIGGEKRL 166          
The following BLAST results are available for this feature:
BLAST of FC925596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ACTP22.674e-3757.95Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_LEPBA2.674e-3754.02Adenine phosphoribosyltransferase OS=Leptospira bi... [more]
APT_BRASO2.674e-3752.87Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_BRASB2.674e-3752.87Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_NITEU2.676e-3755.81Adenine phosphoribosyltransferase OS=Nitrosomonas ... [more]
APT_AGRT53.483e-3754.88Adenine phosphoribosyltransferase OS=Agrobacterium... [more]
APT_BRAJA3.484e-3753.66Adenine phosphoribosyltransferase OS=Bradyrhizobiu... [more]
APT_PHOLL4.535e-3755.17Adenine phosphoribosyltransferase OS=Photorhabdus ... [more]
APT_PASMU4.537e-3755.43Adenine phosphoribosyltransferase OS=Pasteurella m... [more]
APT_SHEFN4.537e-3750.55Adenine phosphoribosyltransferase OS=Shewanella fr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 TF Citrus clementina cDNA clone KN0AAP11YH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925596 ID=FC925596; Name=FC925596; organism=Citrus clementina; type=EST; length=600bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
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