FC925596

Overview
NameFC925596
Unique NameFC925596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_FRATO (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=apt PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.548e-30
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  +++AG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 62.3882 bits (150), Expect = 4.548e-30
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDSLGGREVL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_FRATH (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=apt PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.548e-30
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  +++AG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 62.3882 bits (150), Expect = 4.548e-30
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDSLGGREVL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_FRATF (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=apt PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.548e-30
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  +++AG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIIAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 62.3882 bits (150), Expect = 4.548e-30
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDSLGGREVL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_CALS8 (Adenine phosphoribosyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.548e-30
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EY LEYGKD++EMH+ A+Q G++ +I+DDL+ATGGT  + I+L+E++G  VV  A ++EL  L GRE L
Sbjct:   91 EYELEYGKDILEMHIDAIQPGQKVVIIDDLLATGGTTLSNIKLVEKLGGKVVGIAYLVELTYLNGRENL 159          

HSP 2 Score: 71.2478 bits (173), Expect = 4.548e-30
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +    R + +FPK GI F DITT+L D  AF+  ID  V   KD +  ++ G E+RGFIFG P+A  +    V +RK  KLP + +S
Sbjct:    3 LKEKFRHVLNFPKEGIDFIDITTVLQDKDAFKYAIDSLVNLVKDLDFDLIVGPESRGFIFGAPVAYVLNKGLVLVRKKGKLPYKTVS 89          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_LACDB (Adenine phosphoribosyltransferase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=apt PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.548e-30
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV 357
            I  + DFP  GI+F+DIT +L D +AF        E  K +   V+ G EARGF+ G P+A+ +G  FVP RKP KLP EV
Sbjct:    9 IASVKDFPNEGIIFRDITPILQDGEAFAAATHEIAEYAKSRQADVIVGPEARGFLVGTPVAIELGIGFVPARKPHKLPREV 89          

HSP 2 Score: 75.0998 bits (183), Expect = 4.548e-30
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG +V+EMH  A++ G+R +I DDL+AT GT+ A   L+ER+G  VV  A  IEL +LKGRE   +  +F
Sbjct:   94 YDLEYGSNVLEMHKDAIKPGQRVVICDDLMATAGTMHATKELIERLGGKVVGAAFYIELTDLKGREKFPDVDIF 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_LACDA (Adenine phosphoribosyltransferase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=apt PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.548e-30
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV 357
            I  + DFP  GI+F+DIT +L D +AF        E  K +   V+ G EARGF+ G P+A+ +G  FVP RKP KLP EV
Sbjct:    9 IASVKDFPNEGIIFRDITPILQDGEAFAAATHEIAEYAKSRQADVIVGPEARGFLVGTPVAIELGIGFVPARKPHKLPREV 89          

HSP 2 Score: 75.0998 bits (183), Expect = 4.548e-30
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG +V+EMH  A++ G+R +I DDL+AT GT+ A   L+ER+G  VV  A  IEL +LKGRE   +  +F
Sbjct:   94 YDLEYGSNVLEMHKDAIKPGQRVVICDDLMATAGTMHATKELIERLGGKVVGAAFYIELTDLKGREKFPDVDIF 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_LACSS (Adenine phosphoribosyltransferase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=apt PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.550e-30
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1
Query:  124 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +PDFP+ G+ F+DI+ L+ D +A+    D  VE  K+K + ++ G EARGFI G P+A  +G  F P RK  KLP E +S
Sbjct:   12 VPDFPEAGVTFRDISPLMSDGEAYAAATDKIVEYAKNKGVEMIVGPEARGFIVGCPVAYKLGVGFAPARKKGKLPRETVS 91          

HSP 2 Score: 73.9442 bits (180), Expect = 4.550e-30
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYGK  + MH  AV+ G++ L+ DDL+ATGGT++A I+++E +G  VV  A  IEL +L GRE + +  +F
Sbjct:   94 YGLEYGKSTLYMHKDAVKPGQKVLVTDDLLATGGTIAATIKMVEELGGIVVGTAFFIELKDLNGREKIKDYDIF 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_ARTS2 (Adenine phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=apt PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.913e-30
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  353 RLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            ++  E+Y+LEYG   +E+H   + AG R LI+DD++ATGGTL AA RL ER GVHV     V+EL EL+GR  L
Sbjct:  101 KVISEDYALEYGTATLELHTADLPAGSRVLILDDVLATGGTLGAAARLFERCGVHVAGVGVVMELGELRGRSAL 174          

HSP 2 Score: 70.4774 bits (171), Expect = 5.913e-30
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I+S    +PD+PKPGI+F+D+T +  +  A R  +D  VE +K +    VAG+EARGF+     A A     + +RK  KLP +VIS
Sbjct:   19 INSLCATVPDYPKPGIIFKDLTPVFANGAALRAVVDALVEPFKGQ-FDAVAGVEARGFLLAAAAAYATDTGVITVRKAGKLPRKVIS 104          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_FRATT (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. tularensis GN=apt PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.922e-30
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 61.6178 bits (148), Expect = 5.922e-30
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_FRATN (Adenine phosphoribosyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=apt PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.922e-30
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNI--SVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP 348
            I S I  +PDFPKPGIMF+DIT LL D +  R T +   +  K+K I  ++VAG E+RGFIFG  +A  +G  FVP+RKP KLP
Sbjct:    6 IKSKIAAVPDFPKPGIMFRDITPLLADPQGLRKTAEAMAQELKNKGIQPTIVAGTESRGFIFGVALAEVLGLGFVPVRKPGKLP 89          

HSP 2 Score: 61.6178 bits (148), Expect = 5.922e-30
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            +Y LEYG D +E+H  A +  +  L+VDDL+ATGGT  A + L+E+    V     V+EL  L GRE L
Sbjct:   96 KYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTAKATVDLIEKTQAKVAGLIFVMELDGLGGREVL 164          
The following BLAST results are available for this feature:
BLAST of FC925596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_FRATO4.548e-3052.38Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRATH4.548e-3052.38Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRATF4.548e-3052.38Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_CALS84.548e-3053.62Adenine phosphoribosyltransferase OS=Caldicellulos... [more]
APT_LACDB4.548e-3046.91Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_LACDA4.548e-3046.91Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_LACSS4.550e-3045.00Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_ARTS25.913e-3052.70Adenine phosphoribosyltransferase OS=Arthrobacter ... [more]
APT_FRATT5.922e-3053.57Adenine phosphoribosyltransferase OS=Francisella t... [more]
APT_FRATN5.922e-3053.57Adenine phosphoribosyltransferase OS=Francisella t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 TF Citrus clementina cDNA clone KN0AAP11YH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925596 ID=FC925596; Name=FC925596; organism=Citrus clementina; type=EST; length=600bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
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