FC925596

Overview
NameFC925596
Unique NameFC925596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_STRMU (Adenine phosphoribosyltransferase OS=Streptococcus mutans GN=apt PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.896e-29
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + + I  I D+P+ G+ F+DI+ L+ +  A+   I   V+   DK I ++ G EARGFI G P+A  +G  F P+RKP KLP EVI
Sbjct:    3 LKNYIATIEDYPQEGVTFRDISPLMANGNAYSYAIREIVQYATDKKIDMIVGPEARGFIVGCPVAYELGVGFAPVRKPGKLPREVI 88          

HSP 2 Score: 73.559 bits (179), Expect = 4.896e-29
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            Y  EYG D + MH  A++ G+R LIVDDL+ATGGT+ A I ++ER+G  V  CA +IEL  L GR+ +
Sbjct:   92 YEKEYGIDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIERLGGIVAGCAFLIELDGLDGRQAI 159          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_CAMJR (Adenine phosphoribosyltransferase OS=Campylobacter jejuni (strain RM1221) GN=apt PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.364e-29
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  112 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFS 98          

HSP 2 Score: 59.3066 bits (142), Expect = 6.364e-29
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 2
Query:  359 FPEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            F  EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   97 FSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_CAMJJ (Adenine phosphoribosyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=apt PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.364e-29
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  112 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFS 98          

HSP 2 Score: 59.3066 bits (142), Expect = 6.364e-29
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 2
Query:  359 FPEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            F  EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   97 FSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_CAMJD (Adenine phosphoribosyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=apt PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.364e-29
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  112 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFS 98          

HSP 2 Score: 59.3066 bits (142), Expect = 6.364e-29
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 2
Query:  359 FPEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            F  EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   97 FSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_CAMJ8 (Adenine phosphoribosyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=apt PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.364e-29
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  112 AIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +IR+IPDFPK GI+F+DITTLL + +A    +    ERYKD N+  +AG E+RGFIF   I   +   FVP+RKP KLP E  S
Sbjct:   15 SIRIIPDFPKKGIIFRDITTLLNNKEALNFLLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFS 98          

HSP 2 Score: 59.3066 bits (142), Expect = 6.364e-29
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 2
Query:  359 FPEEYSLEYGKDVMEMHVGAVQ--AGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            F  EY LEYG D +E+H  A +     R L+VDDL+ATGGT  A+  L+++ G   VE   ++ L +L G   L
Sbjct:   97 FSCEYDLEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKDLNGANKL 170          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_LACJO (Adenine phosphoribosyltransferase OS=Lactobacillus johnsonii GN=apt PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 6.371e-29
Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  + DFP  GI+F+DIT +L D K +R       +  K +   V+ G EARGFI G P+A  +G  FVP RKP KLP EV S
Sbjct:    9 IASVQDFPNKGIVFRDITPILQDGKLYRAATHELADYAKSRGAEVIVGPEARGFIVGCPVATELGVGFVPARKPHKLPREVES 91          

HSP 2 Score: 72.0182 bits (175), Expect = 6.371e-29
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG +V+EMH  A++ G++ +I DDL+AT GTL A   L+E +G  VV  A  IEL +LKGRE   +  ++
Sbjct:   94 YDLEYGSNVLEMHKDAIKPGQKVVICDDLMATAGTLHATKELIENLGGEVVGAAFYIELTDLKGREQFPDLDIY 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_LACBA (Adenine phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=apt PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.374e-29
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I  +PD+P+ GIMF+DI+ L+ D +AF    D  V   KDK++ +V G EARGFI G P+A  +G  F P RK  KLP E +
Sbjct:    9 IASVPDYPEKGIMFRDISPLMADGQAFHAATDEIVAYAKDKDVEMVVGPEARGFIVGCPVAYEMGIGFAPARKEGKLPRETV 90          

HSP 2 Score: 68.5514 bits (166), Expect = 6.374e-29
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG+  + +H  A++ G++ L+ DDL+ATGGT+ A I+L+E +G  VV  A +IEL +L GR+ L    +F
Sbjct:   94 YDLEYGQSALYLHKDAIKPGQKVLVTDDLLATGGTIGATIQLVEDLGGIVVGTAFLIELQDLHGRDKLKGYDIF 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_EXIS2 (Adenine phosphoribosyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=apt PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.374e-29
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EY LEYGKDV+ MH  A+Q G+R +I+DDL+ATGGT+ A I+++E++G  V     +IEL  L GRE L
Sbjct:   91 EYGLEYGKDVLTMHHDAIQPGQRVVILDDLLATGGTIEATIKMIEQLGGTVAGIGFLIELDGLGGREKL 159          

HSP 2 Score: 71.633 bits (174), Expect = 6.374e-29
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I+ + ++PK GI F+DIT+L+ +  A++ ++D  ++  + +   V+AG EARGF+ G P A A+   FVP+RK  KLP E +
Sbjct:    7 IKEVENWPKEGISFKDITSLMQNGPAYKQSVDALIDYARKQGADVIAGPEARGFVVGCPAAYAMEIGFVPVRKEGKLPRETV 88          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_SPHAL (Adenine phosphoribosyltransferase OS=Sphingopyxis alaskensis GN=apt PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.282e-29
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            ++S +R IPDFP+PGI F+DITTL+ D   F +++             ++  +EARGF+FG  +A A+G   VP+RK  KLPG  I
Sbjct:   12 LASLVRTIPDFPRPGIQFRDITTLIGDAVGFAESVRRLSACAAAYRPDLIVAVEARGFLFGAAMATAMGLGVVPVRKAGKLPGVTI 97          

HSP 2 Score: 71.633 bits (174), Expect = 8.282e-29
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLG 577
            +Y LEYG D +E+H GAV  G R ++VDDL+ATGGT+ A   L+  VG  V     VI+LP+L G   LG
Sbjct:  100 DYELEYGTDRLELHEGAVLPGHRVVLVDDLLATGGTILATAALMRSVGAEVAAALFVIDLPDLGGSARLG 169          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_FRASN (Adenine phosphoribosyltransferase OS=Frankia sp. (strain EAN1pec) GN=apt PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.282e-29
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   97 AGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            A + + +R + DFPKPG++F+DIT LL    AF   +    +  +    + +AGIEARGF+   P+A  +GA  VP+RK  KLPG   S
Sbjct:   15 AVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRS 103          

HSP 2 Score: 73.1738 bits (178), Expect = 8.282e-29
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLG 577
            GR   E Y+LEYG  V+E+H  AV  GER LIVDD++ATGGT +AA  LL   G  VV  A ++EL  L GR+  G
Sbjct:   99 GRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTG 174          
The following BLAST results are available for this feature:
BLAST of FC925596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_STRMU4.896e-2943.02Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_CAMJR6.364e-2952.38Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_CAMJJ6.364e-2952.38Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_CAMJD6.364e-2952.38Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_CAMJ86.364e-2952.38Adenine phosphoribosyltransferase OS=Campylobacter... [more]
APT_LACJO6.371e-2946.99Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_LACBA6.374e-2947.56Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_EXIS26.374e-2953.62Adenine phosphoribosyltransferase OS=Exiguobacteri... [more]
APT_SPHAL8.282e-2943.02Adenine phosphoribosyltransferase OS=Sphingopyxis ... [more]
APT_FRASN8.282e-2941.57Adenine phosphoribosyltransferase OS=Frankia sp. (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 TF Citrus clementina cDNA clone KN0AAP11YH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925596 ID=FC925596; Name=FC925596; organism=Citrus clementina; type=EST; length=600bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
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