FC925596

Overview
NameFC925596
Unique NameFC925596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_STRGB (Adenine phosphoribosyltransferase OS=Streptomyces galbus GN=apt PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.829e-28
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            ++S IR + D+P+PG+MF+DIT LL D  AF    D      +    + V G+EARGFI G P+A+  G  F+P+RK  KLPG  +S+
Sbjct:   11 LASRIRDVADYPEPGVMFKDITPLLADPVAFTALTDTLAAGRRRHPRTKVVGLEARGFILGAPVAVRAGLGFIPVRKAGKLPGATLSQ 98          

HSP 2 Score: 66.6254 bits (161), Expect = 1.829e-28
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G    + Y LEYG   +E+H   + AG+R LIVDD++ATGGT  AAI+L+ R G  V   A ++EL  L GR  L
Sbjct:   93 GATLSQAYDLEYGSAEIEVHAEDLAAGDRVLIVDDVLATGGTAEAAIQLIRRAGAEVCGLAVLMELGFLGGRARL 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_STACT (Adenine phosphoribosyltransferase OS=Staphylococcus carnosus (strain TM300) GN=apt PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.832e-28
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  124 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + D+PK G+ F+DITT++ + +A+    D  VE  ++K + +V G EARGFI G P+A ++G  F P+RK  KLP EVI
Sbjct:   10 VQDWPKEGVDFKDITTIMDNGEAYGYATDQIVEFAREKEVDIVVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVI 88          

HSP 2 Score: 71.633 bits (174), Expect = 1.832e-28
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            EY LEYG +V+ MH  A++ G+R LI DDL+ATGGT+ A I+L+E +G  VV  A +IEL  L G + L
Sbjct:   91 EYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVVGIAFIIELKYLHGIDKL 159          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_MYCPU (Adenine phosphoribosyltransferase OS=Mycoplasma pulmonis GN=apt PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.386e-28
Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLG 577
            G +   EY LEYGKD++E+  G ++ G++A+I+DD++ATGGT  A I LLE  G  V++   ++EL  L GR   G
Sbjct:   83 GEVIKHEYDLEYGKDILEIQKGVIKPGDKAIIIDDVLATGGTTKAIIDLLESQGAKVIKIILLLELTNLNGRSKFG 158          

HSP 2 Score: 69.707 bits (169), Expect = 2.386e-28
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I+ + DFPK GI F+DI+ LL + +A   TI    E  KD +I  + G +ARGF+FG P A  +   F+ +RK  KLPGEVI
Sbjct:    7 IKDVKDFPKQGINFKDISPLLANGQALNYTIKKMAELAKDADI--IVGPDARGFLFGTPTAAFLSKPFIMVRKKGKLPGEVI 86          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_SYNS3 (Adenine phosphoribosyltransferase OS=Synechococcus sp. (strain CC9311) GN=apt PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.105e-28
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR 565
            G+++  +Y+LEYG D +E+H  A++   R L+VDDL+ATGGT SA   L+++ G  +V CA ++EL ELKGR
Sbjct:   85 GKVYGIDYALEYGTDRLEIHADAMRGQPRILVVDDLLATGGTASATADLVKQAGGQLVGCAFIVELTELKGR 156          

HSP 2 Score: 70.4774 bits (171), Expect = 3.105e-28
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV 357
            ++ IPDFPKPGI+F+DI+ +L D   + + +D            ++ GIEARGFI G  +A      FVP+RKP KLPG+V
Sbjct:    7 VQDIPDFPKPGILFRDISPMLRDPVGWAEVMDRLGVLCDSLKPDLIVGIEARGFIVGMGLATHKKLGFVPVRKPGKLPGKV 87          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_PROMM (Adenine phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=apt PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.105e-28
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVP 598
            +YSLEYG D +E+H  A+Q   R L+VDDL+ATGGT  A + L+E+ G  +V C  VIEL  L GR+ L   P+ +P
Sbjct:   91 DYSLEYGSDRLEIHADALQGHPRVLLVDDLLATGGTARATVELIEKAGGDLVGCGFVIELAALGGRQQL---PVEIP 164          

HSP 2 Score: 71.2478 bits (173), Expect = 3.105e-28
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I+ +PDFPKPGI+F+DI+ LL D   + + +    +   +    ++ GIE+RGFI G  +A      FVP+RKP KLPG+V+
Sbjct:    7 IQDVPDFPKPGILFRDISPLLRDPDGWDEVMRQLGDLCTELKPDLIVGIESRGFIVGTALATNRKIGFVPVRKPGKLPGDVL 88          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_STRCO (Adenine phosphoribosyltransferase OS=Streptomyces coelicolor GN=apt PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.036e-28
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 1
Query:  109 SAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            S IR + D+P+PG++F+DIT LL D  AF    D   E       + V G+EARGFI G P+AL  G  F+P+RK  KLPG  +S+
Sbjct:   13 SRIRDVADYPEPGVVFKDITPLLADPGAFAALTDALAEAAGRTGATKVVGLEARGFILGAPVALRAGLGFIPVRKAGKLPGATLSQ 98          

HSP 2 Score: 64.3142 bits (155), Expect = 4.036e-28
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            G    + Y LEYG   +E+H   + AG+R L+VDD++ATGGT  A++ L+ R G  V   A ++EL  L GR  L
Sbjct:   93 GATLSQAYDLEYGSAEIEVHAEDLTAGDRVLVVDDVLATGGTAEASLELIRRAGAEVAGLAVLMELGFLGGRARL 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_PROM3 (Adenine phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=apt PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.043e-28
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 2
Query:  368 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLFVP 598
            +YSLEYG D +E+H  A+Q   R L+VDDL+ATGGT  A + L+E+ G  +V C  VIEL  L GR+ L   P+ +P
Sbjct:   91 DYSLEYGSDRLEIHADALQGHPRVLMVDDLLATGGTAKATVELIEQAGGDLVGCGFVIELAALGGRQQL---PVEIP 164          

HSP 2 Score: 71.2478 bits (173), Expect = 4.043e-28
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  115 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            I+ IPDFPKPGI+F+DI+ LL D   + + +    +   +    ++ GIE+RGFI G  +A      FVP+RKP KLPG+V+
Sbjct:    7 IQDIPDFPKPGILFRDISPLLRDPDGWGEVMRQLGDLCTEFKPDLIVGIESRGFIVGTALATNRKIGFVPVRKPGKLPGDVL 88          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_ASHGO (Adenine phosphoribosyltransferase OS=Ashbya gossypii GN=APT1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.249e-28
Identity = 38/90 (42.22%), Postives = 58/90 (64.44%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLF----VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + +A+   P+FPK G++F+D   +    + F+  ID F     E + +  I  + G+E+RGF+FGP +ALAIGA FVP+RK  KLPG+V+
Sbjct:   10 LKAALAQYPNFPKEGVLFEDFLPIFRSPQLFQKLIDAFKMHLAEAFPETKIDYLVGLESRGFLFGPSLALAIGAGFVPVRKAGKLPGQVV 99          

HSP 2 Score: 63.1586 bits (152), Expect = 5.249e-28
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 2
Query:  350 GRLFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            G++    Y  EY +DV EM V ++  G   ++VDD++ATGG+  AA  L++++G  ++E   V+EL  LKGRE L + P+F
Sbjct:   96 GQVVKTTYVKEYEEDVFEMQVDSIPVGATVVVVDDILATGGSAGAAGDLIKQLGATILEFIFVMELDFLKGREKL-QAPVF 175          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_PSEMY (Adenine phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=apt PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.255e-28
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I + IR +PDFPKPG++F+DIT L    +A R   D F++RY +   S +  ++ARGF+ G  IA  +    +  RK  KLP +V+S
Sbjct:    8 IKTLIRPVPDFPKPGVVFRDITPLFQSPRALRMVADSFIQRYVEAEFSHIGAMDARGFLIGSIIAYELNKPLILFRKQGKLPADVLS 94          

HSP 2 Score: 67.3958 bits (163), Expect = 5.255e-28
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y  EYG+  +E+H  ++  G+  LI DDL+ATGGTL AA  L+ R+   V E A +I+LPEL G + L
Sbjct:   95 ESYQTEYGEAFLEVHSDSLCEGDSVLIFDDLIATGGTLIAAANLVRRMRASVFEAAAIIDLPELGGSQKL 164          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_UREPA (Adenine phosphoribosyltransferase OS=Ureaplasma parvum GN=apt PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.263e-28
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I S IR +PDFPK GI+F+DIT L L+ K     +D F +  K  NI  + G E+RGF+F  P+++ +   F+ +RKP KLP +V S
Sbjct:    7 IKSKIRDVPDFPKKGIVFKDITPLFLEPKIIEKIVDDFADFAKSLNIDAIIGAESRGFLFAAPLSIKLNKPFILVRKPNKLPNDVYS 93          

HSP 2 Score: 60.8474 bits (146), Expect = 5.263e-28
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 2
Query:  356 LFPEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            ++  EY+LEYG   +EMH  A++  +R LIVDDL+ATGGT++A   L+ +    V     +I L  LKG E L  K
Sbjct:   91 VYSAEYTLEYGSSRVEMHKDALKPNQRVLIVDDLLATGGTVAAIENLVRQAKGIVAGSVYLIRLGFLKGEEKLSGK 166          
The following BLAST results are available for this feature:
BLAST of FC925596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_STRGB1.829e-2844.32Adenine phosphoribosyltransferase OS=Streptomyces ... [more]
APT_STACT1.832e-2845.57Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_MYCPU2.386e-2844.74Adenine phosphoribosyltransferase OS=Mycoplasma pu... [more]
APT_SYNS33.105e-2848.61Adenine phosphoribosyltransferase OS=Synechococcus... [more]
APT_PROMM3.105e-2849.35Adenine phosphoribosyltransferase OS=Prochlorococc... [more]
APT_STRCO4.036e-2846.51Adenine phosphoribosyltransferase OS=Streptomyces ... [more]
APT_PROM34.043e-2849.35Adenine phosphoribosyltransferase OS=Prochlorococc... [more]
APT_ASHGO5.249e-2842.22Adenine phosphoribosyltransferase OS=Ashbya gossyp... [more]
APT_PSEMY5.255e-2841.38Adenine phosphoribosyltransferase OS=Pseudomonas m... [more]
APT_UREPA5.263e-2844.83Adenine phosphoribosyltransferase OS=Ureaplasma pa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 TF Citrus clementina cDNA clone KN0AAP11YH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925596 ID=FC925596; Name=FC925596; organism=Citrus clementina; type=EST; length=600bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
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