FC925596

Overview
NameFC925596
Unique NameFC925596
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_VIBC3 (Adenine phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=apt PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.124e-38
Identity = 47/88 (53.41%), Postives = 67/88 (76.14%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE+YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP + +++
Sbjct:    9 IKSSIKSIPDYPKKGILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRQTVAQ 96          

HSP 2 Score: 73.559 bits (179), Expect = 7.124e-38
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQLGGEVEHAAFVINLPEIGGDKRL 165          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_SOLUE (Adenine phosphoribosyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=apt PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.133e-38
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVI 360
            + S IR +PDFPKPGI+F DITTLL D   F   ID   + Y+D  +  V GIEARGFIF P +A A+GA FVP+RKPKKLP E +
Sbjct:    4 LKSLIREVPDFPKPGILFYDITTLLKDPSGFHGVIDGLKDHYRDIKVDTVLGIEARGFIFAPALAYALGAGFVPVRKPKKLPAECV 89          

HSP 2 Score: 72.0182 bits (175), Expect = 7.133e-38
Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = 2
Query:  371 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEKPLF 592
            Y LEYG D +EMH  A+  G R LIVDDL+ATGGT SAA R+++  G  VV    VIEL  L GR+ L    +F
Sbjct:   93 YDLEYGTDTLEMHKDAIGNGHRVLIVDDLLATGGTASAAARMVQDAGGIVVGLGFVIELTFLAGRQRLNGHDVF 166          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_SERP5 (Adenine phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=apt PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 9.261e-38
Identity = 45/87 (51.72%), Postives = 66/87 (75.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PKPGI+F+D+T+LL +  A+  +I+L VER+++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   +S
Sbjct:   26 IKDSIKTIPDYPKPGILFRDVTSLLENPLAYAASIELLVERFREAGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLS 112          

HSP 2 Score: 76.2554 bits (186), Expect = 9.261e-38
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG D +E+H  A+ AG++ L+VDDL+ATGGT+ A  +L+ R+G  V + A +I LP+L G   L
Sbjct:  113 ESYELEYGTDKLEIHTDAISAGDKVLVVDDLLATGGTIEATAKLIRRLGGEVTDAAFIINLPDLGGEARL 182          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_SHEPW (Adenine phosphoribosyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=apt PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.277e-38
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            +A I ++I+ IPD+PK GI+F+D+T+LL D +A++ TI L VE YK++  + V G EARGF+FG P+AL +G  FVP+RKP KLP E IS
Sbjct:    8 LALIKNSIKTIPDYPKEGILFRDVTSLLEDPQAYKLTIGLLVEHYKEQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETIS 97          

HSP 2 Score: 73.559 bits (179), Expect = 9.277e-38
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            E Y LEYG DV+E+HV A+   ++ L+VDDL+ATGGT+ A ++L+  +G  V   A VI LP+L G + L
Sbjct:   98 ESYELEYGHDVLEIHVDAITKEDKVLVVDDLLATGGTIEATVKLIRNLGGQVNHAAFVISLPDLGGEKRL 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_YERE8 (Adenine phosphoribosyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=apt PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.208e-37
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I  +I+ IPD+PK GI+F+D+T+LL D  A+  +I+L  ERY DK ++ V G EARGF+FG P+AL++G  FVP+RKP KLP   IS
Sbjct:   15 IKDSIKTIPDYPKAGILFRDVTSLLEDPLAYAASIELLTERYLDKGVTKVVGTEARGFLFGAPVALSLGVGFVPVRKPGKLPRATIS 101          

HSP 2 Score: 75.0998 bits (183), Expect = 1.208e-37
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGEK 583
            E Y LEYG D +E+H  +++ G++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G   L ++
Sbjct:  102 ESYELEYGTDKLEIHTDSIKPGDKVLVIDDLLATGGTIEATVKLIRKLGGEVTDAAFVINLPDLGGEARLNDQ 174          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_HAES2 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 2336) GN=apt PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.210e-37
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP+ PK GI+F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++
Sbjct:    7 IKSSIKSIPNHPKEGIIFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQ 94          

HSP 2 Score: 79.337 bits (194), Expect = 1.210e-37
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            + Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G   L E
Sbjct:   94 QSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_HAES1 (Adenine phosphoribosyltransferase OS=Haemophilus somnus (strain 129Pt) GN=apt PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.210e-37
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            I S+I+ IP+ PK GI+F+DIT+L    +AF+ TIDL +ERYK K I+ V G E+RGFIFG P+ALA+   F+ +RKP KLP E I++
Sbjct:    7 IKSSIKSIPNHPKEGIIFRDITSLTEVPEAFQATIDLIIERYKSKGITKVIGTESRGFIFGAPVALALNVPFILVRKPGKLPRETIAQ 94          

HSP 2 Score: 79.337 bits (194), Expect = 1.210e-37
Identity = 36/72 (50.00%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            + Y LEYG+D +EMHV ++QAG+  L++DDL+ATGGT+ A ++L+ER+   V   A VI LP+L G   L E
Sbjct:   94 QSYQLEYGQDTLEMHVSSIQAGDNVLVIDDLLATGGTIEATVKLVERLQGQVKHAAFVISLPDLGGEVRLRE 165          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_ERWCT (Adenine phosphoribosyltransferase OS=Erwinia carotovora subsp. atroseptica GN=apt PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.575e-37
Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 363
            I ++I+ IPD+PKPGI+F+D+T+LL D  A+  +ID+   RY++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   IS
Sbjct:   13 IKNSIKSIPDYPKPGILFRDVTSLLEDPVAYAASIDMLANRYRNTGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRPTIS 99          

HSP 2 Score: 74.7146 bits (182), Expect = 1.575e-37
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            E Y LEYG D +E+H  A+ AG+  L++DDL+ATGGTL A ++L+ R+G  V + A +I L +L G + L E
Sbjct:  100 ESYELEYGSDTLEIHADAISAGDNVLVIDDLLATGGTLEATVKLIRRLGGTVNDAAFIINLFDLGGEQRLTE 171          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_PSEHT (Adenine phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=apt PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.575e-37
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  103 ISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISRRVFL 378
            I ++I  I D+PK GIMF+D+TTL+ +  AF+ TID F+  YKD+  + + G E+RGFIFG P++ A+G  F+P+RKP KLP EV+ +   L
Sbjct:    9 IKNSITTIADYPKAGIMFRDVTTLMANPDAFKATIDAFIAAYKDQGFTKIIGTESRGFIFGAPLSYALGIPFIPVRKPGKLPREVVRQDYLL 100          

HSP 2 Score: 76.6406 bits (187), Expect = 1.575e-37
Identity = 32/72 (44.44%), Postives = 53/72 (73.61%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPLGE 580
            ++Y LEYG+D +E+HV A+  G++ L+VDDL+ATGGT+ A I+L++++G    + A V+ LPEL G + + +
Sbjct:   96 QDYLLEYGEDTLELHVDAIVPGDKVLLVDDLLATGGTIEATIKLVQKLGGEATDAAFVVSLPELGGEKRIAK 167          
BLAST of FC925596 vs. ExPASy Swiss-Prot
Match: APT_VIBVY (Adenine phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=apt PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.052e-37
Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 1
Query:   94 IAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISR 366
            IA I ++I+ IPD+PKPGI+F+D+T+LL D +A++ TI L V++YKD   + V G EARGF+FG P+AL +G  FVP+RKP KLP   I++
Sbjct:    6 IAQIQASIKSIPDYPKPGILFRDVTSLLEDAQAYQATIQLLVDKYKDMGFTKVVGTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQ 96          

HSP 2 Score: 69.3218 bits (168), Expect = 2.052e-37
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  365 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGREPL 574
            + Y LEYG D +E+H  A+  G++ L+VDDL+ATGGT+ A  +L+ ++G  V   A VI LPE+ G + L
Sbjct:   96 QSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVINLPEIGGDKRL 165          
The following BLAST results are available for this feature:
BLAST of FC925596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_VIBC37.124e-3853.41Adenine phosphoribosyltransferase OS=Vibrio choler... [more]
APT_SOLUE7.133e-3858.14Adenine phosphoribosyltransferase OS=Solibacter us... [more]
APT_SERP59.261e-3851.72Adenine phosphoribosyltransferase OS=Serratia prot... [more]
APT_SHEPW9.277e-3854.44Adenine phosphoribosyltransferase OS=Shewanella pi... [more]
APT_YERE81.208e-3754.02Adenine phosphoribosyltransferase OS=Yersinia ente... [more]
APT_HAES21.210e-3754.55Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_HAES11.210e-3754.55Adenine phosphoribosyltransferase OS=Haemophilus s... [more]
APT_ERWCT1.575e-3752.87Adenine phosphoribosyltransferase OS=Erwinia carot... [more]
APT_PSEHT1.575e-3748.91Adenine phosphoribosyltransferase OS=Pseudoalterom... [more]
APT_VIBVY2.052e-3753.85Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH06FM1 TF Citrus clementina cDNA clone KN0AAP11YH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925596 ID=FC925596; Name=FC925596; organism=Citrus clementina; type=EST; length=600bp
CACTGACTATAACTTGCGTTTTGAGTAGTGAGTGGTGACTCGACGCAACC
TCAACAAATGGCTTCAGCTGACGTAAAAGCACAAGACCCTCGAATCGCTG
GGATTTCCTCAGCAATTCGTGTCATCCCAGACTTCCCTAAACCAGGGATT
ATGTTTCAAGATATCACAACATTGCTTCTTGATACCAAGGCTTTTAGAGA
TACTATTGATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCTGTTG
TTGCAGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTG
GCTATTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGG
GGAGGTTATTTCCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATG
GAGATGCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGA
CGATCTAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTG
AGCGAGTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCA
GAGCTAAAGGGTCGGGAACCGCTGGGAGAGAAACCACTATTTGTTCCTGT
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