FC925597
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP16_MACFA (Ubiquitin carboxyl-terminal hydrolase 16 OS=Macaca fascicularis GN=USP16 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPY-------MSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVK-------------------DF----RGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 340 K++ AP +LT+ LKRFQ F K+NK + FPE LDL+P+ +++ R +Y LY VV H + + GHY Y K DF +G W+ + D V +V +VL+ AY+L Y R+ Sbjct: 685 KQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRV-LYSLYGVVEHSGTMRS---GHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTHVQAVPTTKVLNSQAYLLFYERI 825
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP16_HUMAN (Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens GN=USP16 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 47/145 (32.41%), Postives = 69/145 (47.59%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPY-------MSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVK-------------------DF----RGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 340 K++ AP +LT+ LKRFQ F K+NK + FPE LDL+P+ +++ R +Y LY VV H + + GHY Y K DF +G W+ + D V +V +VL+ AY+L Y R+ Sbjct: 682 KQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRV-LYSLYGVVEHSGTMRS---GHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTHVQAVPTTKVLNSQAYLLFYERI 822
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP16_XENTR (Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus tropicalis GN=usp16 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 45/135 (33.33%), Postives = 62/135 (45.93%), Query Frame = 2 Query: 32 ILTIALKRFQSGRFG--KLNKRVTFPETLDLSPYMSD------GGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFR------------------------GHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 340 ILT+ LKRFQ F K+N+ + FPE LDL+P+ + G+ +Y LY V+ H + + GHY +VK R G WY + D V +V L VLS AY+L Y R+ Sbjct: 732 ILTLHLKRFQQNGFNLRKINRHIKFPEVLDLAPFCTSKCKNIPAGESRLLYSLYGVIEHSGSMRS---GHYTAFVKLRRPNQQLCEMVLKGVIPEVSGSEPGQGSWYHISDSHVQAVSLSRVLSSQAYLLFYERM 863
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP16_BOVIN (Ubiquitin carboxyl-terminal hydrolase 16 OS=Bos taurus GN=USP16 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 48/145 (33.10%), Postives = 67/145 (46.21%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPYMS-----DGGDRTDV-YKLYAVVVHVDMLNASFFGHYICYVK-------------------DF-----RGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 340 K++ AP +LT+ KRFQ F K+NK + FPE LDL+P+ + + T V Y LY VV H + + GHY Y K DF +G W+ + D V +V +VLS AY+L Y R+ Sbjct: 684 KQMLISLAPPVLTLHFKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEHTRVLYSLYGVVEHSGTMRS---GHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQWFHISDTHVQAVPTTKVLSSQAYLLFYERI 825
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP8_YEAST (Ubiquitin carboxyl-terminal hydrolase 8 OS=Saccharomyces cerevisiae GN=UBP8 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQ---SGRFGKLNKRVTFPETLDLSPYMS--------DGGDRTDV-YKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLY 331 K+L + P++L + LKRF+ +G KL+ + FP L++ Y S + G D+ Y+L +V H +N GHYI + K G W++ +D V+S+ EEVL + AY+L Y Sbjct: 347 KQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE---GHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFY 465
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP12_YEAST (Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae GN=UBP12 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFPET-LDLSPYMSDGGD-RTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGH-WYRVDDCKVTSVDLEEVLSQGAYMLLYNR 337 K++ P+IL I LKRF+S R K++ V FP T LDLS Y+ D R +Y LYAV H L GHY YVK+F + WY DD +VT E ++ AY+L Y R Sbjct: 996 KQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGG---GHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIR 1109
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: UBP11_ARATH (Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis thaliana GN=UBP11 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFP-ETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDF-RGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKE 394 K+L + P+IL LKRF R+ K++ V F LDLS Y+ + ++ +Y+LYA+ H L GHY Y K WY DD +V++V+ E+ + AY+L Y RV + D+E+S + + Sbjct: 767 KKLDLWKLPDILVFHLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGG---GHYTAYAKLMDETKWYNFDDSRVSAVNESEIKTSAAYVLFYQRVKS------DSETSDMKMD 892
BLAST of FC925597 vs. ExPASy Swiss-Prot
Match: NOT_DROME (Ubiquitin carboxyl-terminal hydrolase nonstop OS=Drosophila melanogaster GN=not PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 36/116 (31.03%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 2 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFPETLDLSPYMSDGGDRTDVYK--LYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNR 337 K+ + R P++++ LKRF+ K++ + FP D++P+MS+ + ++ LYAVV HV ++ GHY YV+ + W + DD +T L++VL Y+L Y++ Sbjct: 617 KQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT---GHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHK 729 The following BLAST results are available for this feature:
BLAST of FC925597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925597 ID=FC925597; Name=FC925597; organism=Citrus clementina; type=EST; length=698bpback to top |