FC925600

Overview
NameFC925600
Unique NameFC925600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.420e-18
Identity = 58/172 (33.72%), Postives = 94/172 (54.65%), Query Frame = 2
Query:   83 VVMVLLVLINIQNYYYGAKAAPQ-----VPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            +++  LVLI ++     A AA Q     +P   +FGDS++D GNNN L +L + N+ PYG D+P G  TGRFS+G+   D+IA+ LG    +P Y     + +D+L+GV +AS   G    T + +   IS   Q+ N++  + ++    G E++A + L    + +   SN
Sbjct:    5 ILLFALVLIFVE-----ANAATQGKNTTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAK-IMSVISVWDQLINFKEYISKIKRHFG-EEKAKDILEHSFFLVVSSSN 169          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.420e-18
Identity = 54/164 (32.93%), Postives = 89/164 (54.27%), Query Frame = 2
Query:   95 LLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR---GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            +L L +I      A+        F FGDS++D GNNN L +L + NY PYG+ F    PTGRF NG+   D++A+ L     +P YS  R    +D+  GV +AS  +GI + T R L   +S   QVK++++ ++++  ++  + +    +S  ++ I  G+N
Sbjct:    8 VLSLFSIYVLSSAAEKNTSFSALFAFGDSVLDTGNNNFLLTLLKGNYWPYGLSFDYKFPTGRFGNGRVFTDIVAEGLQIKRLVPAYSKIRRISSEDLKTGVCFASGGSGIDDLTSRTL-RVLSAGDQVKDFKDYLKKLRRVVKRKKKVKEIVSNAVFLISEGNN 170          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.385e-18
Identity = 55/149 (36.91%), Postives = 82/149 (55.03%), Query Frame = 2
Query:  146 PQVPCYFIFGDSLVDNGNNNQLS-SLARANYLPYGIDFP-NGPTGRFSNGKTTVDVIAQLLGFDGYIPPYSAAR--GQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            P  P   IFGDS  D GNNN  S ++ +AN+LPYG+D P +   GRFSNGK   DVI+  L    ++PP+       QDI+ GV +ASA AG  +ET       I  S Q   ++N + ++  ++G++ +A   ++  +  I  G N +
Sbjct:   29 PLFPAILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFASAGAGYDDETSLS-SKAIPVSQQPSMFKNYIARLKGIVGDK-KAMEIINNALVVISAGPNDF 175          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.385e-18
Identity = 55/170 (32.35%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   74 KWWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            K  ++++ LVLI ++           +P   +FGDS++D GNNN L +L + N+ PYG D+P G  TGRFS+G+   D+IA+ LG    +P Y  S  + +D+L+GV +AS   G    T + +   IS   Q+  ++  + ++    G E++A + L    + +   SN
Sbjct:    2 KLQILLLALVLIAVEANAVKQGINATIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGDATGRFSDGRVPSDLIAEKLGLAKTLPAYMNSYLKPEDLLKGVTFASRGTGYDPLTAK-IMSVISVWDQLIYFKEYISKIKRHFG-EEKAKDILEHSFFLVVSSSN 169          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.385e-18
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 2
Query:   86 VMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            V+VLL   +  N          VP   +FGDS+VD GNN+ + + AR +Y PYGIDF  G  TGRFSNGK   D++A+ LG    IP Y     + +++L GV +AS  AG    T +     I    Q+  ++  ++++  ++G E +    +   ++ +  GSN
Sbjct:   28 VLVLLSTTSTTNALVKIPKNTTVPAVIVFGDSIVDAGNNDDMITEARCDYAPYGIDFDGGVATGRFSNGKVPGDIVAEELGIKPNIPAYRNPNLKPEELLTGVTFASGGAGYVPLTTKIAVGGIPLPQQLIYFEEYIEKLKQMVG-EKRTKFIIKNSLFVVICGSN 192          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 53/165 (32.12%), Postives = 91/165 (55.15%), Query Frame = 2
Query:   89 MVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            ++LL L+N+ N    A  +P +   + FGDS VD+GNNN + +L ++N+ PYG  FP+   TGRFS+GK   D I   LG    +P Y   + +  D+L GV++ASA  G+ + T +     I+   Q   ++  + ++ +L+G + +    +   ++ I  G+N
Sbjct:   17 ILLLQLLNLTN----ASPSPPITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKS-SLTITMDKQWSYFEEALGKMKSLVG-DSETNRVIKNAVFVISAGTN 175          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.095e-17
Identity = 61/182 (33.52%), Postives = 90/182 (49.45%), Query Frame = 2
Query:   77 WWVVMVLLVLINIQNYYYGAKAAPQVPCYFIFGDSLVDNGNNNQL-SSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQ------------LGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            W V  ++L+     N           P   +FGDS+VD GNN+ + ++LAR NY PYGIDF  G PTGRF NGK   D IA   G    IP Y     + +D+L GV +AS  AG    T +             L   I+ S Q+K ++  V+++  ++G E++    +   ++ +  GSN
Sbjct:   20 WCVFFLVLLCKTSTNALVKQPPNETTPAIIVFGDSIVDAGNNDDIMTTLARCNYPPYGIDFDGGIPTGRFCNGKVATDFIAGKFGIKPSIPAYRNPNLKPEDLLTGVTFASGGAGYVPFTTQLSTYLFIYKPLLFLKGGIALSQQLKLFEEYVEKMKKMVG-EERTKLIIKNSLFMVICGSN 200          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17
Identity = 52/143 (36.36%), Postives = 83/143 (58.04%), Query Frame = 2
Query:  155 PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSN 574
            P  F FGDS++D GNN+ + +L +AN+LPYG++FP+  PTGRF NGK   D IA  +G    +P Y       +D+L GV++AS  +G    T   +   I  S Q+  +Q  +++V   +G E +A + +S+ +  +  GS+
Sbjct:   77 PAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPIVV-SAIPMSKQLTYFQEYIEKVKGFVGKE-KAEHIISKGLAIVVAGSD 217          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.868e-17
Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 2
Query:  140 AAPQVPCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            A  ++P   +FGDS VD+GNNN +S++ARAN+ PYG DFP G  TGRF NG+ + D  ++  G    +P Y   +    D   GV +ASA  G    T   LG  I    +V+ ++     +   LG+  +AA  +   +Y + +G+N +
Sbjct:   22 AGAKIPAIIVFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTADVLG-VIPLWKEVEYFKEYQSNLSAYLGHR-RAAKIIRESLYIVSIGTNDF 169          
BLAST of FC925600 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.440e-17
Identity = 53/145 (36.55%), Postives = 83/145 (57.24%), Query Frame = 2
Query:  155 PCYFIFGDSLVDNGNNNQLSSLARANYLPYGIDFPNG-PTGRFSNGKTTVDVIAQLLGFDGYIPPY--SAARGQDILRGVNYASAAAGIREETGRQLGDRISFSGQVKNYQNTVQQVVNLLGNEDQAANYLSRCIYSIGLGSNHY 580
            P   +FGDS VD+GNNNQ+S++ ++N+ PYG D+ +G  TGRFSNG+   D I++ LG    +P Y   A    D   GV +ASA  G+   T   L   +    +V+ Y+    ++ + LG E++A   +S  +Y I +G+N +
Sbjct:   28 PALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATSAVL-SVMPLWKEVEYYKEYQTRLRSYLG-EEKANEIISESLYLISIGTNDF 170          
The following BLAST results are available for this feature:
BLAST of FC925600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
GDL25_ARATH6.420e-1833.72GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
EXL6_ARATH6.420e-1832.93GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL41_ARATH8.385e-1836.91GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL24_ARATH8.385e-1832.35GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]
EXL1_ARATH8.385e-1833.73GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
GDL47_ARATH1.095e-1732.12GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
EXL2_ARATH1.095e-1733.52GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]
GDL4_ARATH1.868e-1736.36GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL48_ARATH1.868e-1735.33GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL66_ARATH2.440e-1736.55GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH08FM1 TF Citrus clementina cDNA clone KN0AAP11YH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925600 ID=FC925600; Name=FC925600; organism=Citrus clementina; type=EST; length=581bp
TCAATTTTGATCTTTCCTCATCTCATCTGGGTTTTAGAATTTGTTTCCTC
TTTCGGGCTTGATGGATTTAAGAAAATGGTGGGTGGTGATGGTGTTGTTG
GTTTTGATCAATATACAGAATTATTATTATGGGGCTAAAGCAGCGCCTCA
AGTGCCTTGCTACTTCATATTTGGGGATTCATTGGTGGATAACGGGAATA
ATAATCAACTATCTTCATTGGCTAGAGCTAATTATTTGCCTTATGGAATT
GACTTCCCTAATGGTCCTACAGGAAGATTTTCCAATGGCAAAACTACCGT
CGATGTCATTGCCCAACTTCTGGGCTTCGACGGTTACATTCCTCCATATT
CGGCTGCAAGAGGTCAGGATATACTCAGAGGAGTCAATTATGCATCTGCA
GCTGCTGGTATCAGGGAGGAAACTGGTCGACAGCTGGGAGATCGAATCAG
TTTTAGTGGGCAGGTAAAGAATTACCAAAACACGGTTCAGCAAGTAGTGA
ACTTACTAGGAAATGAAGATCAAGCTGCAAATTACCTGAGCCGATGCATA
TACTCAATCGGATTAGGCAGCAACCACTACC
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