FC925729

Overview
NameFC925729
Unique NameFC925729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.399e-41
Identity = 89/192 (46.35%), Postives = 123/192 (64.06%), Query Frame = 1
Query:   94 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            LF++   S  D SIV Y +   + +      + ++ +FE+W +KH K Y  + EK  RFEIFKDNL++IDE N +N +Y +GLN FAD++N+E++  Y G+  G   T+  S   +  L      +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+DCD   + GCNGG
Sbjct:   17 LFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSY--EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGG 199          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.428e-39
Identity = 86/185 (46.49%), Postives = 114/185 (61.62%), Query Frame = 1
Query:  115 SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGG 669
            S  D SIV Y +   + +      + ++ +F +W +KH K Y  + EK  RFEIFKDNL++IDE N     Y +GLN F+DL+N+E++  Y+G+              + ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G
Sbjct:   24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRG 198          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.087e-39
Identity = 91/214 (42.52%), Postives = 121/214 (56.54%), Query Frame = 1
Query:   55 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AF
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAF 206          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39
Identity = 91/214 (42.52%), Postives = 120/214 (56.07%), Query Frame = 1
Query:   55 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AF
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAF 206          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36
Identity = 67/89 (75.28%), Postives = 79/89 (88.76%), Query Frame = 1
Query:  421 LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            L   +SDRYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAF
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAF 90          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 83/202 (41.09%), Postives = 117/202 (57.92%), Query Frame = 1
Query:   91 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            L+FLF    A+  S         S +S    +D +M  FE W  ++G+ Y    EK +RF+IFK+N++ I+  NS N  +Y +G+N+F D+T  E+ + Y G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A+
Sbjct:    7 LVFLFLFLCAMWAS--------PSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAY 193          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 74/161 (45.96%), Postives = 99/161 (61.49%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            F  W + H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ YLG +F A  +SL   + ++       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAF
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAF 183          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33
Identity = 84/204 (41.18%), Postives = 112/204 (54.90%), Query Frame = 1
Query:   79 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAF 687
            M + +  +FT+   L +S +S       K        +    F  W   + KAY    E   R+E FK N+ ++   NS+     +GLN+ ADL+NEEYR  YLG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AF
Sbjct:    1 MRLSITLIFTLI-VLSISFISAGNVFSHK--------QYQDSFIDWMRSNNKAYTHK-EFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAF 194          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33
Identity = 73/177 (41.24%), Postives = 108/177 (61.02%), Query Frame = 1
Query:  160 SKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            S +S     D +M  FE W  ++G+ Y    EK  RF+IFK+N+  I+  N+ N  +Y +G+N+F D+TN E+ + Y G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAY 193          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.912e-33
Identity = 78/168 (46.43%), Postives = 99/168 (58.93%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAF 687
            ++ W   H K Y    E+E R  I++ NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAF 198          
The following BLAST results are available for this feature:
BLAST of FC925729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PAPA1_CARPA3.399e-4146.35Papain OS=Carica papaya PE=1 SV=1[more]
PAPA4_CARPA1.428e-3946.49Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP2_HORVU7.087e-3942.52Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU9.256e-3942.52Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CYSPL_SOLLC4.299e-3675.28Low-temperature-induced cysteine proteinase (Fragm... [more]
BROM1_ANACO6.864e-3441.09Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP5_DICDI2.608e-3345.96Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP3_DICDI2.608e-3341.18Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
ANAN_ANACO4.449e-3341.24Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATS_MOUSE9.912e-3346.43Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO17FM1 TF Citrus clementina cDNA clone KN0AAP8YO17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925729 ID=FC925729; Name=FC925729; organism=Citrus clementina; type=EST; length=688bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCC
AAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGG
TATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCC
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