FC925729

Overview
NameFC925729
Unique NameFC925729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32
Identity = 77/164 (46.95%), Postives = 100/164 (60.98%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAF 687
            F  W + H + Y++  E   RF IFK N+ +I+E N++     +GLN FAD+TNEEYR+ YLG  F A  +SL+   S++     G    +SVDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AF
Sbjct:   30 FTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDA--SSLEMTPSEKVF---GGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAF 187          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32
Identity = 71/162 (43.83%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAF 687
            F  + V+HGK Y    E ++RF IF ++L  +   N     Y++G+NRFAD++ EE+++  LGA      T   + R      R   ALP++ DWR+ G V+ VKDQG CGSCW FST  ++E      TG  +SLSEQ+LVDC T+YN  GC+GGL   AF
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRM-----RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAF 218          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32
Identity = 81/196 (41.33%), Postives = 112/196 (57.14%), Query Frame = 1
Query:  109 VSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAF 687
            V SAL + +VS     +  S     + E    F  W + H + Y++  E   R+ IFK N+ +++E N++     +GLN FAD++NEEYR+ YLG  F A  +SL+   SD+      +     VDWR +GAV  +K+QG CG CW+FST  A EG   +  G  +L+SLSEQ L+DC  SY N GC GGLM  AF
Sbjct:    3 VLSALCVLLVSVATAKQQLS-----EVEYRNAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDA--SSLEMTESDKIFDASAQ-----VDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAF 185          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32
Identity = 71/162 (43.83%), Postives = 100/162 (61.73%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAF 687
            F  + V++GK+Y +  E  KRF IF ++L+ +   N +  +Y++G+NRFAD++ EE+R+  LGA      T   + R    +     ALP++ DWR+ G V+ VK+QG CGSCW FST  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AF
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHR----MRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAF 216          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 73/162 (45.06%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAF 687
            F  + ++H K Y+++ E ++RFEIF DNL+ I  HN +  +YK+G+N F DLT +E+R   LGA      T+  +      L      LP++ DWRK G V+ VK QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AF
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGN------LKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAF 212          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAF 687
            F  W +K  + Y++  E   R+ IFK N+ ++D  NS+  +  V GLN FAD+TNEEYR  YLG R  A   +    R    +  + +  P S+DWR K AV  +KDQG CGSCW+FST  + EG + + T  L+SLSEQ LVDC     N GC+GGLM+ AF
Sbjct:   36 FTEWTLKFNRQYSS-SEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDL-QTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAF 196          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 76/163 (46.63%), Postives = 95/163 (58.28%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAF 687
            K GK Y +  E + RF +FK NLR    H   + +   G+ +F+DLT  E+R  +LG R G K    K       LP   E LP+  DWR  GAV  VK+QGSCGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AF
Sbjct:   57 KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLP--KDANKAPILPT--ENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAF 215          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 82/208 (39.42%), Postives = 116/208 (55.77%), Query Frame = 1
Query:   91 LLFLF-TVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAF 687
            L+F+F +VS   D  ++      E++     ++D     F  +  K GK Y ++ E   RF +FK NL     H   + + + G+ +F+DLT  E+R  +LG + G K    K       LP   + LP+  DWR +GAV  VK+QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AF
Sbjct:   13 LIFVFVSVSVCGDEDVLIRQVVDETEPKVLSSEDH----FTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLP--KDANQAPILPT--QNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAF 212          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.431e-31
Identity = 77/170 (45.29%), Postives = 101/170 (59.41%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAF 687
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R  +LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AF
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAF 212          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31
Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = 1
Query:  214 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAF 687
            W   +GK Y    E+  R  I++ NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y     + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC   Y N+GCNGG M  AF
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAF 188          
The following BLAST results are available for this feature:
BLAST of FC925729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP6_DICDI1.295e-3246.95Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
ORYC_ORYSJ2.884e-3243.83Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP7_DICDI2.884e-3241.33Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP2_MAIZE2.884e-3243.83Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CYSP3_SOLLC4.919e-3245.06Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CYSP2_DICDI4.919e-3245.40Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
RD19A_ARATH8.391e-3246.63Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH1.096e-3139.42Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP_PEA1.431e-3145.29Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATS_SAIBB4.164e-3144.17Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO17FM1 TF Citrus clementina cDNA clone KN0AAP8YO17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925729 ID=FC925729; Name=FC925729; organism=Citrus clementina; type=EST; length=688bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCC
AAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGG
TATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCC
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