FC925729

Overview
NameFC925729
Unique NameFC925729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN--RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 684
            +HGKA+    E+  RF  FK N++     N++N    Y V   +FADLT +E+  +YL   + A+   LK  + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A
Sbjct:   48 RHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVS-GKFADLTPQEFAKLYLNPDYYARH--LKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQA 199          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 70/152 (46.05%), Postives = 86/152 (56.58%), Query Frame = 1
Query:  253 EKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAF 687
            E++ R  I++ NL+FI  HN E+     +Y VG+N   D+T EE          G+ R      RS        + LPDSVDWR+KG V  VK QGSCGSCWAFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M  AF
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGY-----MGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAF 188          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 68/165 (41.21%), Postives = 92/165 (55.76%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            +E W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +    R+         Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSH---SNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAF 186          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 69/162 (42.59%), Postives = 96/162 (59.26%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAF 687
            K+G+ Y    E   R  IF+ N ++I+E N +      T+ + +N+F D+T EE+ ++  G          +S     + P+  E  P +  VDWR KGAV  VKDQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF
Sbjct:   26 KYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKG------NIPRRSAPVSVFYPKK-ETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAF 180          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   85 MFLLFLFTVS----SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV--GEA---LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            MFL ++F V+    +   +S ++YD ++  +            +F  + VK+ K Y    EKE RFEIFK NL  I+  N+   +    +N  AD+++ E      G +    R     K++    P V  G++   +PDS DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AF
Sbjct:   11 MFLPWVFCVALLTLNVCAVSYIAYDMSNAQE------------LFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGE---KKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAF 204          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26
Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 1
Query:  166 SSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            SS+   ++ +   +E W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF
Sbjct:   14 SSALYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAF 187          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.365e-26
Identity = 69/166 (41.57%), Postives = 95/166 (57.23%), Query Frame = 1
Query:  205 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            ++ W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAF 187          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.033e-26
Identity = 73/163 (44.79%), Postives = 90/163 (55.21%), Query Frame = 1
Query:  214 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAF 687
            W   H + Y A  E+  R  +++ N++ I+ HN E    K G    +N F D+TNEE+R M +G     K    K  R   +L      LP SVDWRKKG V  VK+Q  CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGG M  AF
Sbjct:   32 WKATHRRLYGA-NEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQM-MGCFRNQKFRKGKVFREPLFLD-----LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAF 187          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 8.986e-26
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  298 IDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAF 687
            I++HN E      ++ + +N F D+TNEE+R +  G ++   R   K K+  +R LP +    P SVDWR+KG +  VKDQG CGSCWAFS   A+EG     TG LISL+EQ LVDC     NEGCNGG MD  F
Sbjct:    2 IEQHNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQKHR---KGKQFQERLLPEI----PTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPF 130          
BLAST of FC925729 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25
Identity = 67/174 (38.51%), Postives = 95/174 (54.60%), Query Frame = 1
Query:  166 SSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 687
            ++S   ++ +   F  +  KHG+ Y +  E+  R  +F++NL     H + N     G+  F+DLT EE+RS Y     GA   +   +R+   +       P +VDWR +GAV  VKDQG CGSCWAFS I  VE    +    L +LSEQ LV CD + + GC+GGLM+ AF
Sbjct:   25 TASLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHN---GAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAF 194          
The following BLAST results are available for this feature:
BLAST of FC925729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP1_LEIPI1.061e-2645.51Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATS_RAT1.061e-2646.05Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATK_RABIT1.386e-2641.21Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CYSP2_HOMAM1.811e-2642.59Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATV_GVXN1.811e-2636.19Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATK_PIG1.811e-2639.66Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_CANFA2.365e-2641.57Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATL2_HUMAN4.033e-2644.79Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL6_HUMAN8.986e-2647.79Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CYSP_TRYCR1.533e-2538.51Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO17FM1 TF Citrus clementina cDNA clone KN0AAP8YO17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925729 ID=FC925729; Name=FC925729; organism=Citrus clementina; type=EST; length=688bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCC
AAAGATGGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGG
TATGTTCGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCC
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