FC925768

Overview
NameFC925768
Unique NameFC925768
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 4.447e-12
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVRIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAPF 488
            EL+S +F RA  AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT+   +   +S+ RA F
Sbjct:    3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAF 88          

HSP 2 Score: 36.1946 bits (82), Expect = 4.447e-12
Identity = 21/68 (30.88%), Postives = 35/68 (51.47%), Query Frame = 1
Query:  487 FYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKR 690
            FY+  Q LGA+ GA ++     A   G L    + +++  T G  +  E+  T  LV  +F++TD +R
Sbjct:   88 FYVAAQLLGAVAGAALLHEITPADIRGDL--AVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERR 153          
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 5.782e-12
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVR-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRA 482
            EL+S SF+RA +AEF+ + L+      T++G+  S         + G A AFG     LV     +SGGHINPA+TL   LA +LSL RA
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRA 86          

HSP 2 Score: 34.6538 bits (78), Expect = 5.782e-12
Identity = 23/72 (31.94%), Postives = 34/72 (47.22%), Query Frame = 1
Query:  484 LFYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKRSAR 699
            L Y++ Q LGA+ GAGV+ G   A   G L  G   +      G G   E++ T   +  VF++ D +   R
Sbjct:   87 LGYLLAQLLGALAGAGVLYGVTPAAVRGTL--GLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR 156          
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.265e-11
Identity = 30/91 (32.97%), Postives = 46/91 (50.55%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVRIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAPF 488
            E +S+SF+RA  AEF  T  +++  +   +             +  IA AFG ++  +V     +SG HINPAVT    +  ++SL RA F
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASL-----KWAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIF 88          

HSP 2 Score: 37.3502 bits (85), Expect = 1.265e-11
Identity = 23/72 (31.94%), Postives = 34/72 (47.22%), Query Frame = 1
Query:  484 LFYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKRSAR 699
            +FY+  Q LGA+ GA V+ G   A   G L    + +  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   87 IFYIAAQLLGAVAGAAVLYGVTPAAIRGNL--ALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 1.641e-11
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVRIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAPF 488
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA F
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVF 88          

HSP 2 Score: 33.8834 bits (76), Expect = 1.641e-11
Identity = 20/69 (28.99%), Postives = 34/69 (49.28%), Query Frame = 1
Query:  484 LFYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKR 690
            +FY+  Q LGA+ GA ++         G L    + + +  T G  +  E+  T  LV  +F++TD +R
Sbjct:   87 VFYVAAQLLGAVAGAALLHEITPPAIRGDL--AVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERR 153          
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 1.641e-11
Identity = 35/91 (38.46%), Postives = 49/91 (53.85%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVRIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAPF 488
            EL+S +F RA +AEF+AT LF++  + + +    S        +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA F
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAF 88          

HSP 2 Score: 35.4242 bits (80), Expect = 1.641e-11
Identity = 21/69 (30.43%), Postives = 34/69 (49.28%), Query Frame = 1
Query:  487 FYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKRS 693
            FY+  Q LGA+ GA ++         G L    + + +  T G  +  E+  T  LV  +F++TD +RS
Sbjct:   88 FYVAAQLLGAVAGAAILHEITPVEIRGDL--AVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRS 154          
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 2.131e-11
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVRIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAPF 488
            EL+S +F RA +AEF+AT LF++  + + +    S        +  IA AFG  I +LV     +SG HINPAVT+   +   +S  RA F
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAF 88          

HSP 2 Score: 33.8834 bits (76), Expect = 2.131e-11
Identity = 20/68 (29.41%), Postives = 33/68 (48.53%), Query Frame = 1
Query:  487 FYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKR 690
            FY+  Q LGA+ GA ++         G L    + + +  T G  +  E+  T  LV  +F++TD +R
Sbjct:   88 FYVAAQLLGAVAGAAILHEITPVEIRGDL--AVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERR 153          
BLAST of FC925768 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.766e-11
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  216 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVRIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAPF 488
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT+   +   +S  RA F
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVF 88          

HSP 2 Score: 33.113 bits (74), Expect = 2.766e-11
Identity = 20/69 (28.99%), Postives = 33/69 (47.83%), Query Frame = 1
Query:  484 LFYMVMQCLGAICGAGVVKGFMGAGQYGRLPGGAHVVAHGYTKGDGLGAEIIGTFVLVYPVFSATDAKR 690
            +FY+  Q LGA+ GA ++         G L    + + +  T G  +  E+  T  LV  +F +TD +R
Sbjct:   87 VFYVAAQLLGAVAGAALLHEITPPAIRGDL--AVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRR 153          
The following BLAST results are available for this feature:
BLAST of FC925768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
AQP2_HUMAN4.447e-1239.56Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
MIP_CHICK5.782e-1242.22Lens fiber major intrinsic protein OS=Gallus gallu... [more]
MIP_RANPI1.265e-1132.97Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_BOVIN1.641e-1138.46Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
AQP2_MOUSE1.641e-1138.46Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP2_RAT2.131e-1138.46Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQP2_SHEEP2.766e-1138.46Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK10FM1 TF Citrus clementina cDNA clone KN0AAP11YK10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925768 ID=FC925768; Name=FC925768; organism=Citrus clementina; type=EST; length=700bp
CCTCACAACCTCCAACGGCCACAAACAAAAAAGCAAGTGCTTCTTATTGA
CTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGAGGA
TGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGG
CGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGCCG
CTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTAT
AGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAG
TGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCCGCATTCAA
GGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCAC
AGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGT
TCTTGGCGAGGAAGCTGTCGCTGACACGTGCACCTTTTCTACATGGTGAT
GCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGG
GTGCCGGCCAATACGGGCGGCTCCCCGGCGGTGCCCACGTCGTAGCTCAT
GGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGT
TCTTGTCTACCCAGTTTTCTCCGCCACTGATGCCAAACGGAGCGCCCGGG
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