FC925852

Overview
NameFC925852
Unique NameFC925852
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: INM1_YEAST (Inositol monophosphatase 1 OS=Saccharomyces cerevisiae GN=INM1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 94/238 (39.50%), Postives = 131/238 (55.04%), Query Frame = 2
Query:   65 SLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKG---QVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTE------LVKSLLATEAGTKRDKPTLDASTNRINSLLF----KVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIVE 739
            S+ KFL     A ++ G II++     K+ + K     VD+VT  DK  E LI+  +K Q+PT KFIGEE+    G T +TD+PT+I+DP+DGTTNFVH FPF C S+GLT+ K P+VGV+YNP ++ L +   G G   N K     S+ E      L KS++A + G+ R+             LL      V   R  GS A+ +  IA G LD +++ G    WDV AG  I++
Sbjct:    7 SIEKFLCEL--ATEKVGPIIKSKSGTQKDYDLKTGSRSVDIVTAIDKQVEKLIWESVKTQYPTFKFIGEESYVK-GETVITDDPTFIIDPIDGTTNFVHDFPFSCTSLGLTVNKEPVVGVIYNPHINLLVSASKGNGMRVNNKDYDYKSKLESMGSLILNKSVVALQPGSAREGKNFQTKMATYEKLLSCDYGFVHGFRNLGSSAMTMAYIAMGYLDSYWDGGCYS-WDVCAGWCILK 240          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_HAEIN (Inositol-1-monophosphatase OS=Haemophilus influenzae GN=suhB PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.560e-34
Identity = 89/222 (40.09%), Postives = 127/222 (57.21%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L+ A+ AA++AG +I   + +   +E   KG  D VT  DKA E  I   +++ +P H  I EET    GA E  D    WI+DPLDGT NF+ G P   +SI + +     VGVVY+PI +ELFT V G+GA  N   ++V S+ E+  S+LAT    K+ K  + A    +N+L+      R +GS AL+LC +A  R+D ++E+G    WD AAG +IV
Sbjct:    5 LNIAIRAARKAGNVIAKNYERRDAIESTQKGINDYVTNVDKASEAEIIEVIRKSYPDHTIITEET----GAIEGKDSDVQWIIDPLDGTRNFMTGLPHFSVSIAVRVKNRTEVGVVYDPIRNELFTAVRGEGAKLNEVRLRVDSKREIQGSILATGFPFKQPK-LMPAQFAMMNALIEDAADFRRTGSAALDLCYVASNRIDGYFEMGLKA-WDCAAGDLIV 220          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_PASMU (Inositol-1-monophosphatase OS=Pasteurella multocida GN=suhB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.733e-33
Identity = 84/222 (37.84%), Postives = 129/222 (58.11%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVEH--KGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L+ A+ AA++AG +I  G+ +  +++   K   D VT  DKA E+ I   +++ +P H  I EE+    GA E  D    W++DPLDGTTNFV G P   +SI + +     VGVVY+PI +ELFT V G+GA  N   ++V ++ +L  ++L T    K+ +  +      +N+L+      R  GS AL+LC +A GR+D ++E+G    WD+AAG +IV
Sbjct:    5 LNIAIRAARKAGNVIAKGYERRDDLQTTLKSTNDYVTNIDKASEEAIIEVIRKSYPDHTIITEES----GALEGKDSDIQWVIDPLDGTTNFVKGLPHFSVSIAIRVKGRTEVGVVYDPIRNELFTAVRGEGAKINDMRLRVENKRDLAGTVLTTGFPFKQTR-LMPMQFAMMNNLIQDCADFRRMGSAALDLCYVAAGRVDGYFEVGVKA-WDIAAGDLIV 220          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_ECOLI (Inositol-1-monophosphatase OS=Escherichia coli (strain K12) GN=suhB PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33
Identity = 87/222 (39.19%), Postives = 124/222 (55.86%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L  ++LAT    K  K       N +  L  +    R +GS AL+L  +A GR+D F+E+G   PWD AAG ++V
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLV 220          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_ECOL6 (Inositol-1-monophosphatase OS=Escherichia coli O6 GN=suhB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33
Identity = 87/222 (39.19%), Postives = 124/222 (55.86%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L  ++LAT    K  K       N +  L  +    R +GS AL+L  +A GR+D F+E+G   PWD AAG ++V
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLV 220          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_ECO57 (Inositol-1-monophosphatase OS=Escherichia coli O157:H7 GN=suhB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33
Identity = 87/222 (39.19%), Postives = 124/222 (55.86%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPT-WIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L+ AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  E TD+   W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L  ++LAT    K  K       N +  L  +    R +GS AL+L  +A GR+D F+E+G   PWD AAG ++V
Sbjct:    5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEES----GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLV 220          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFA (Inositol-1-monophosphatase OS=Xylella fastidiosa GN=suhB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.467e-32
Identity = 76/217 (35.02%), Postives = 125/217 (57.60%), Query Frame = 2
Query:   92 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  CISI L     P   V+++P+ +ELFT   G GA  N + I+V+++ +L  ++L T   + R++    A    +++LL +   +R SGS AL+L  +ACGR D ++E G    WDVAAG+++V
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPEYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCISIALVENGEPTDAVIFDPLRNELFTASRGAGAILNERKIRVANRKDLNGTMLNT-GFSPRERSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGI-KVWDVAAGMLLV 219          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_SALTY (Inositol-1-monophosphatase OS=Salmonella typhimurium GN=suhB PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.916e-32
Identity = 85/221 (38.46%), Postives = 121/221 (54.75%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKNVE--HKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L  AV AA++AG +I   +     VE   KG  D VT  DKA E +I + +++ +P H  I EE+    G  +   +  W++DPLDGTTNF+   P   +SI + I     V VVY+P+ +ELFT   GQGA  NG  ++ S+  +L  ++LAT    K  K       N I  L  +    R +GS AL+L  +A GR+D F+E+G   PWD AAG ++V
Sbjct:    5 LTIAVRAARKAGNVIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGEHVGTDQ---DVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKA-KQYATTYINIIGKLFTECADFRRTGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLV 220          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_XYLFT (Inositol-1-monophosphatase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=suhB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.502e-32
Identity = 75/217 (34.56%), Postives = 125/217 (57.60%), Query Frame = 2
Query:   92 VDAAKRAGEIIRNGF--YQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            V AA+ AG ++       +T +V  K ++D  ++ D+  E +I   LK+ +P +  +GEE     G  +      W++DPLDGT+N++ GFP  C+SI L     P   V+++P+ +ELFT   G GA  N + I+V+++ +L  ++L T   + R++    A    +++LL +   +R SGS AL+L  +ACGR D ++E G    WDVAAG+++V
Sbjct:   10 VKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEE-----GGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNT-GFSPRERSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGI-KVWDVAAGMLLV 219          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: SUHB_RHILO (Inositol-1-monophosphatase OS=Rhizobium loti GN=suhB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.268e-32
Identity = 84/227 (37.00%), Postives = 127/227 (55.95%), Query Frame = 2
Query:   80 LDTAVDAAKRAGEIIRNGFYQTKN--VEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTD-EPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTN-----RINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            L+  V AA +AG  +   F + +N  V  KG  D V++ D+  ED+IF  L +  P + F+ EE     GA E  D +  WIVDPLDGTTNF+HG P   +SI L      + GV+YNP MDEL+T   G GAF N + ++V+ + +LV +++          P L    +      + +++ +V  +R  GS AL+L  +A GR+D F+E G    WD+AAG++++
Sbjct:    7 LNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKARPGYGFLMEER----GAVEGEDSQHRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYNPAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGC------GMPHLGRGHHGNFLVELRNVMAEVSGVRRLGSAALDLAYVAAGRMDGFWETGLSA-WDIAAGLLLI 222          
The following BLAST results are available for this feature:
BLAST of FC925852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
INM1_YEAST2.673e-3439.50Inositol monophosphatase 1 OS=Saccharomyces cerevi... [more]
SUHB_HAEIN4.560e-3440.09Inositol-1-monophosphatase OS=Haemophilus influenz... [more]
SUHB_PASMU1.733e-3337.84Inositol-1-monophosphatase OS=Pasteurella multocid... [more]
SUHB_ECOLI8.600e-3339.19Inositol-1-monophosphatase OS=Escherichia coli (st... [more]
SUHB_ECOL68.600e-3339.19Inositol-1-monophosphatase OS=Escherichia coli O6 ... [more]
SUHB_ECO578.600e-3339.19Inositol-1-monophosphatase OS=Escherichia coli O15... [more]
SUHB_XYLFA1.467e-3235.02Inositol-1-monophosphatase OS=Xylella fastidiosa G... [more]
SUHB_SALTY1.916e-3238.46Inositol-1-monophosphatase OS=Salmonella typhimuri... [more]
SUHB_XYLFT2.502e-3234.56Inositol-1-monophosphatase OS=Xylella fastidiosa (... [more]
SUHB_RHILO4.268e-3237.00Inositol-1-monophosphatase OS=Rhizobium loti GN=su... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YL21FM1 TF Citrus clementina cDNA clone KN0AAP11YL21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925852 ID=FC925852; Name=FC925852; organism=Citrus clementina; type=EST; length=739bp
CGTTCTTCTCCTCCTTTTTTTAATCCTGTATAATAAAAAATATACCCATA
TGGCACAAAATGATTCCCTTGCAAAGTTCTTGGACACTGCAGTTGATGCA
GCTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAA
TGTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCAT
GTGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCACGCATAAG
TTCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACCGA
TGAACCCACATGGATTGTCGATCCTCTTGATGGAACAACTAACTTTGTGC
ATGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATT
CCTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGG
AGTCCATGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCAT
CTCAAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGGCTGGAACAAAA
CGTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGCT
ATTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTTT
GTGGAATTGCATGCGGAAGGCTTGATCTGTTTTATGAACTCGGATTTGGA
GGTCCATGGGATGTGGCAGCTGGTGTTGTGATTGTTGAA
back to top