FC925861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR1_BOVIN (Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.856e-29 Identity = 86/208 (41.35%), Postives = 119/208 (57.21%), Query Frame = 1 Query: 55 VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQI--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYQ 669 V K L + G+P SD ++ + + LK E VLL+ LYL+ DPYMR M+K S G+ + G VA+V++S + + +V +GW +S+ ++ ++ +PLS G +GMPG+TAY GL ++C K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EKV LK K GFD A NY+ Sbjct: 2 VHAKSWTLKKHFVGYPTNSDFELKTVELPPLKDGE-----VLLEALYLTVDPYMRI-MAK--------SLKEGDMMMGEQVARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEWPDTLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLK-KHGFDVALNYK 194
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.362e-29 Identity = 85/208 (40.87%), Postives = 115/208 (55.29%), Query Frame = 1 Query: 55 VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQI--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYQ 669 V K L + G P +SD ++ + + LK E VLL+ L+LS DPYMR +L G + G VA+V++S + + +V +GW + + + L+ +PLS G +GMPG+TAY GL EVC K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EK+ LK + GFD AFNY+ Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGE-----VLLEALFLSVDPYMRIASKRLKE---------GAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYK 194
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.994e-23 Identity = 72/210 (34.29%), Postives = 112/210 (53.33%), Query Frame = 1 Query: 64 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYQE 672 +RV+L++ G P + ++ ++ V EG V ++ LYLS DPYMR RM++ ++ + + ++G GV + +S H N+ K D V F + ++ IL K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G L GQ +L GC VVG G+ EK L ++ GFD A NY+E Sbjct: 4 QRVVLNSRPGKNGHPVAENFRVEEVNLPDCVNEGQ---VQVRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKE 210
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21 Identity = 68/210 (32.38%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 64 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYQE 672 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V F + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ L GC VVG G+ EK LL ++ GFD A NY++ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKK 210
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.423e-20 Identity = 67/210 (31.90%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 64 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYQE 672 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V F + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ GC VVG G+ EK LL ++ GFD A NY++ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKK 210
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20 Identity = 68/209 (32.54%), Postives = 107/209 (51.20%), Query Frame = 1 Query: 64 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGF-TGWEEYSLVTAPQI-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYQ 669 +RV+L + G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ + +S H AK D V F W+ +++ + + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G+ EK L ++ GFD A NY+ Sbjct: 4 QRVVLDSRPGKNGNPVAENFRVEEVSLPDTINEGQ---VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVNYK 209
BLAST of FC925861 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 68/209 (32.54%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 64 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGF-TGWEEYSLVTAPQI-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYQ 669 +RV+L++ G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ V +S H K D V F W+ +++ + + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G++EK L ++ GFD A NY+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLPDALNEGQ---VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYK 209 The following BLAST results are available for this feature:
BLAST of FC925861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925861 ID=FC925861; Name=FC925861; organism=Citrus clementina; type=EST; length=674bpback to top |