FC925867
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_BACSU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Bacillus subtilis GN=sucD PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 2.754e-33 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK + + KTRL+GPNCPGVI P ECKIGIMP YIHK G +G VSRSGTLTYEAV Q + +G
Sbjct: 106 VKVKRFMEGK-KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVG 171 HSP 2 Score: 73.9442 bits (180), Expect = 2.754e-33 Identity = 40/72 (55.56%), Postives = 43/72 (59.72%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGGTE G+PVFN+VAEA T ANAS IYVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGTEAEGVPVFNTVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_ECOLI (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli (strain K12) GN=sucD PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.756e-33 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 241 NQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNT 402
+++ R++GPNCPGVI PGECKIGI P +IHKPG++G VSRSGTLTYEAV Q T
Sbjct: 113 DEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTT 166 HSP 2 Score: 75.0998 bits (183), Expect = 2.756e-33 Identity = 39/72 (54.17%), Postives = 43/72 (59.72%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGGT HLGLPVFN+V EA A T A AS IYVP PF ++ ITEGIP DM+ K
Sbjct: 38 GVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_ECOL6 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O6 GN=sucD PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.756e-33 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 241 NQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNT 402
+++ R++GPNCPGVI PGECKIGI P +IHKPG++G VSRSGTLTYEAV Q T
Sbjct: 113 DEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTT 166 HSP 2 Score: 75.0998 bits (183), Expect = 2.756e-33 Identity = 39/72 (54.17%), Postives = 43/72 (59.72%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGGT HLGLPVFN+V EA A T A AS IYVP PF ++ ITEGIP DM+ K
Sbjct: 38 GVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_ECO57 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O157:H7 GN=sucD PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.756e-33 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 241 NQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNT 402
+++ R++GPNCPGVI PGECKIGI P +IHKPG++G VSRSGTLTYEAV Q T
Sbjct: 113 DEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTT 166 HSP 2 Score: 75.0998 bits (183), Expect = 2.756e-33 Identity = 39/72 (54.17%), Postives = 43/72 (59.72%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGGT HLGLPVFN+V EA A T A AS IYVP PF ++ ITEGIP DM+ K
Sbjct: 38 GVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_STAES (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sucD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.886e-31 Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK L + KTRLVGPNCPGVI ECKIGIMP YIHK G +G VSRSGTLTYEAV Q T +G
Sbjct: 106 VKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIG 171 HSP 2 Score: 68.1662 bits (165), Expect = 1.886e-31 Identity = 36/72 (50.00%), Postives = 41/72 (56.94%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGG G+PV+N+V EAK ET AN S +YVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGQVVEGVPVYNTVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_STAEQ (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sucD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.886e-31 Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK L + KTRLVGPNCPGVI ECKIGIMP YIHK G +G VSRSGTLTYEAV Q T +G
Sbjct: 106 VKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIG 171 HSP 2 Score: 68.1662 bits (165), Expect = 1.886e-31 Identity = 36/72 (50.00%), Postives = 41/72 (56.94%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGG G+PV+N+V EAK ET AN S +YVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGQVVEGVPVYNTVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_STAAW (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MW2) GN=sucD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.198e-31 Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK L + KTRLVGPNCPGVI ECKIGIMP YIHK G +G VSRSGTLTYEAV Q T +G
Sbjct: 106 VKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIG 171 HSP 2 Score: 67.3958 bits (163), Expect = 3.198e-31 Identity = 37/72 (51.39%), Postives = 40/72 (55.56%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGG G+PVFN+V EAK ET A S IYVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_STAAS (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=sucD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.198e-31 Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK L + KTRLVGPNCPGVI ECKIGIMP YIHK G +G VSRSGTLTYEAV Q T +G
Sbjct: 106 VKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIG 171 HSP 2 Score: 67.3958 bits (163), Expect = 3.198e-31 Identity = 37/72 (51.39%), Postives = 40/72 (55.56%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGG G+PVFN+V EAK ET A S IYVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_STAAR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=sucD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.198e-31 Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK L + KTRLVGPNCPGVI ECKIGIMP YIHK G +G VSRSGTLTYEAV Q T +G
Sbjct: 106 VKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIG 171 HSP 2 Score: 67.3958 bits (163), Expect = 3.198e-31 Identity = 37/72 (51.39%), Postives = 40/72 (55.56%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGG G+PVFN+V EAK ET A S IYVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVK 109
BLAST of FC925867 vs. ExPASy Swiss-Prot
Match: SUCD_STAAN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain N315) GN=sucD PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.198e-31 Identity = 46/67 (68.66%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 217 VRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPRYIHKPGRIGNVSRSGTLTYEAVFQNTAVCLG 417
V+VK L + KTRLVGPNCPGVI ECKIGIMP YIHK G +G VSRSGTLTYEAV Q T +G
Sbjct: 106 VKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIG 171 HSP 2 Score: 67.3958 bits (163), Expect = 3.198e-31 Identity = 37/72 (51.39%), Postives = 40/72 (55.56%), Query Frame = 2
Query: 2 GVTPKKGGTEHLGLPVFNSVAEAKAETKANASAIYVPPPFXXXXXXXXXXXXXXXVVCITEGIPQHDMVNTK 217
GVTP KGG G+PVFN+V EAK ET A S IYVP PF V+CITE IP DMV K
Sbjct: 38 GVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVK 109 The following BLAST results are available for this feature:
BLAST of FC925867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925867 ID=FC925867; Name=FC925867; organism=Citrus clementina; type=EST; length=417bpback to top |