FC925968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.885e-40 Identity = 75/152 (49.34%), Postives = 110/152 (72.37%), Query Frame = 3 Query: 42 EEGKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 + GKV+ V SEGE A CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA +ST ET P+ E++P ++LL P+++ F I D P + + FIS +YDA THFE+ Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFET 412
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDIB_CANFA (Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.885e-40 Identity = 76/152 (50.00%), Postives = 110/152 (72.37%), Query Frame = 3 Query: 42 EEGKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 + GKV+ V SEGE A CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA +ST AET P+ E++P ++LL P+++ F I D P + + FIS +YDA THFE+ Sbjct: 261 QNGKVIGVKSEGEVARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIVSTTAETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFET 412
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDIB_PONAB (Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.200e-40 Identity = 75/152 (49.34%), Postives = 110/152 (72.37%), Query Frame = 3 Query: 42 EEGKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 + GKV+ V SEGE A CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA +ST ET P+ E++P ++LL P+++ F I D P + + FIS +YDA THFE+ Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESLIFISRTYDATTHFET 412
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 1.222e-39 Identity = 75/152 (49.34%), Postives = 108/152 (71.05%), Query Frame = 3 Query: 42 EEGKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 + GKV+ V SEGE A CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA ST ET P+ E++P ++LL P+++ F I D P + + FIS +YDA THFE+ Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFET 412
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.064e-39 Identity = 74/152 (48.68%), Postives = 108/152 (71.05%), Query Frame = 3 Query: 42 EEGKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 + GKV+ V SEGE A CK+++CDPSY+ ++V KVG+V R I I+SHPI NT+D++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA ST ET P+ E++P ++LL P+++ F I D P + + FIS +YDA THFE+ Sbjct: 261 QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVETKEPEKEIRPALELLKPIEQKFVSISDLLVPKDLGTDSQIFISRTYDATTHFET 412
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.304e-38 Identity = 76/165 (46.06%), Postives = 111/165 (67.27%), Query Frame = 3 Query: 3 YMLP*PECKVEFDEEGKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 YML P ++ + ++G + V S + A K+++ DPSY KVR VGR+ RAI I++HPIPNT++ SVQ+I+PQ Q+ R+ D+Y+ S HNV PKG ++A +ST ET +P +E+ PG+ LLGPV E F + + YEPV + + D C+IS S DA +HFE+ Sbjct: 248 YMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVRAICILNHPIPNTDNLDSVQIIIPQNQVKRKHDIYIAGISSVHNVCPKGYYLAIISTIVETANPLSEIAPGLKLLGPVVESFSRVQEIYEPVTDGTKDQCYISKSVDATSHFET 412
BLAST of FC925968 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 6.938e-35 Identity = 75/167 (44.91%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 3 YMLP*PECKVEFDEE-GKVVRVPSEGETAMCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFLSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDHCFISTSYDAPTHFES 497 YML P +V + ++ GK V ++ T V+ DP+Y P K + G RV RAI I++HP+PNT+++ S+Q+I+PQ QLGR+SD+Y+ S +HNV KG ++A +ST ETD P EL+P LLGP++E F I + +EP + S D+ ++S SYDA +HFES Sbjct: 257 YMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFES 423 The following BLAST results are available for this feature:
BLAST of FC925968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925968 ID=FC925968; Name=FC925968; organism=Citrus clementina; type=EST; length=499bpback to top |