FC926016

Overview
NameFC926016
Unique NameFC926016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length757
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC926016 vs. ExPASy Swiss-Prot
Match: DGKH_HUMAN (Diacylglycerol kinase eta OS=Homo sapiens GN=DGKH PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   16 VLVANIGSYMGGVDLWQNEDENYDNFDPQSMHDKVLEVVSISGTWHLGKLQVGLSRARRLAQGQSIRIQLFAP--LPVQIDGEPWFQQPCTLAISHHGQAFMLKR 324
            + V NI SY GG + W    E+ D F   S  DK+LEVV+I  +  +   +V   +  R+AQ ++++I +F    +PVQ+DGE W Q P  + I H  +A ML R
Sbjct:  845 IAVLNIPSYAGGTNFWGGTKED-DIFAAPSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQPPGIIKIVHKNRAQMLTR 948          
BLAST of FC926016 vs. ExPASy Swiss-Prot
Match: DGKA_RAT (Diacylglycerol kinase alpha OS=Rattus norvegicus GN=Dgka PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11
Identity = 46/129 (35.66%), Postives = 59/129 (45.74%), Query Frame = 1
Query:    1 LGAERVLVANIGSYMGGVDLWQNEDENYDNF---------------DPQ-------SMHDKVLEVVSISGTWHLGKLQVGLSRA-RRLAQGQSIRIQLFAPLPVQIDGEPWFQQPCTLAISHHGQAFML 318
            L  E + V NI S  GG +LW +    + +                DP         M DK LEVV I G   +G++   L  A  RLA+   I  Q    LP+Q+DGEPW Q PCT+ I+H  Q  ML
Sbjct:  584 LSLEGIAVLNIPSMHGGSNLWGDTKRPHGDTCGINQALGSVAKIITDPDILKTCVPDMSDKRLEVVGIEGVIEMGQIYTRLKSAGHRLAKCSEITFQTTKTLPMQVDGEPWMQAPCTIKITHKNQMPML 712          
BLAST of FC926016 vs. ExPASy Swiss-Prot
Match: DGKA_MOUSE (Diacylglycerol kinase alpha OS=Mus musculus GN=Dgka PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11
Identity = 47/129 (36.43%), Postives = 59/129 (45.74%), Query Frame = 1
Query:    1 LGAERVLVANIGSYMGGVDLWQNEDENYDNF---------------DPQ-------SMHDKVLEVVSISGTWHLGKLQVGLSRA-RRLAQGQSIRIQLFAPLPVQIDGEPWFQQPCTLAISHHGQAFML 318
            L  E + V NI S  GG +LW +    + +                DP         M DK LEVV I G   +G++   L  A  RLA+   I  Q    LP+QIDGEPW Q PCT+ I+H  Q  ML
Sbjct:  587 LSLEGIAVLNIPSTHGGSNLWGDTKRPHGDTCEINQALGSAAKIITDPDILKTCVPDMSDKRLEVVGIEGAIEMGQIYTRLKSAGHRLAKCSEITFQTTKTLPMQIDGEPWMQAPCTIKITHKNQMPML 715          
BLAST of FC926016 vs. ExPASy Swiss-Prot
Match: DGKH_MESAU (Diacylglycerol kinase eta OS=Mesocricetus auratus GN=DGKH PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   16 VLVANIGSYMGGVDLWQNEDENYDNFDPQSMHDKVLEVVSISGTWHLGKLQVGLSRARRLAQGQSIRIQLFAP--LPVQIDGEPWFQQPCTLAISHHGQAFMLKR 324
            + V NI SY GG + W    E+ D F   S  DK+LEVV++  +  +   +V   +  R+AQ ++++I +F    +PVQ+DGE W Q P  + I H  +A ML R
Sbjct:  835 IAVLNIPSYAGGTNFWGGTKED-DIFAAPSFDDKILEVVAVFDSVQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQPPGIIKIVHKNRAQMLTR 938          
BLAST of FC926016 vs. ExPASy Swiss-Prot
Match: DGKD_HUMAN (Diacylglycerol kinase delta OS=Homo sapiens GN=DGKD PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 1
Query:   16 VLVANIGSYMGGVDLWQNEDENYDNFDPQSMHDKVLEVVSISGTWHLGKLQVGLSRARRLAQGQSIRIQLFAP--LPVQIDGEPWFQQPCTLAISHHGQAFMLKR 324
            + V NI SY GG + W    E+ D F   S  DK+LEVV++ G+  +   +V   +  R+AQ ++++I +     +PVQ+DGE W Q P  + I H  +A  L R
Sbjct:  838 IAVLNIPSYAGGTNFWGGTKED-DTFAAPSFDDKILEVVAVFGSMQMAVSRVIRLQHHRIAQCRTVKISILGDEGVPVQVDGEAWVQPPGYIRIVHKNRAQTLTR 941          
BLAST of FC926016 vs. ExPASy Swiss-Prot
Match: DGKA_HUMAN (Diacylglycerol kinase alpha OS=Homo sapiens GN=DGKA PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 45/129 (34.88%), Postives = 59/129 (45.74%), Query Frame = 1
Query:    1 LGAERVLVANIGSYMGGVDLWQNEDENYDNF---------------DPQ-------SMHDKVLEVVSISGTWHLGKLQVGLSRA-RRLAQGQSIRIQLFAPLPVQIDGEPWFQQPCTLAISHHGQAFML 318
            L  E + V NI S  GG +LW +    + +                DP         + DK LEVV + G   +G++   L  A RRLA+   I       LP+QIDGEPW Q PCT+ I+H  Q  ML
Sbjct:  592 LSLEGIAVLNIPSMHGGSNLWGDTRRPHGDIYGINQALGATAKVITDPDILKTCVPDLSDKRLEVVGLEGAIEMGQIYTKLKNAGRRLAKCSEITFHTTKTLPMQIDGEPWMQTPCTIKITHKNQMPML 720          
The following BLAST results are available for this feature:
BLAST of FC926016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
DGKH_HUMAN3.324e-1138.10Diacylglycerol kinase eta OS=Homo sapiens GN=DGKH ... [more]
DGKA_RAT5.671e-1135.66Diacylglycerol kinase alpha OS=Rattus norvegicus G... [more]
DGKA_MOUSE5.671e-1136.43Diacylglycerol kinase alpha OS=Mus musculus GN=Dgk... [more]
DGKH_MESAU7.406e-1137.14Diacylglycerol kinase eta OS=Mesocricetus auratus ... [more]
DGKD_HUMAN7.406e-1136.19Diacylglycerol kinase delta OS=Homo sapiens GN=DGK... [more]
DGKA_HUMAN9.673e-1134.88Diacylglycerol kinase alpha OS=Homo sapiens GN=DGK... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP5YE24FM1 TF Citrus clementina cDNA clone KN0AAP5YE24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926016 ID=FC926016; Name=FC926016; organism=Citrus clementina; type=EST; length=757bp
CTTGGTGCAGAACGTGTACTTGTTGCAAACATTGGAAGTTACATGGGCGG
TGTAGACCTTTGGCAAAATGAGGACGAAAATTATGATAATTTTGATCCCC
AATCTATGCATGACAAAGTACTAGAGGTTGTGAGCATATCTGGAACATGG
CACCTTGGAAAGCTTCAGGTAGGGCTTTCTCGCGCTCGAAGACTTGCACA
GGGTCAGTCAATTAGGATACAACTATTTGCTCCTTTGCCTGTTCAAATTG
ATGGGGAACCTTGGTTTCAACAACCGTGTACATTAGCCATATCACATCAT
GGGCAGGCCTTCATGTTGAAGAGGGCAGCTGAGGAACCTCTTGGTCATGC
AGCTGCCATAATTACAGATGTGCTTGAGAGTGCTGAAACCAATCGTGTTA
TTAATGCTTCCCAGAAAAGAGCTCTTCTTCAAGAAATGGCATTAAGGCTA
TCTTAAAGGTTTCTTAGACCACTGTAGCTGGTAATACAGCTTTTGGTGGC
ACCGGCATTTTTTAAAATATTAATTTGCTTTATATCCTCCCTTGTATGTC
TTTTAGAATGTTATACATAGAAAGTAATGATGTTAGCAGGAAGTGTGTAT
GTAATTTTGTACACAAAAGGGCCTTACCGAAAATTTTGTAAGATAGAATT
TTGAAAATTTTGTATTGACAGCATTTTAAGTTGCTTGATGTGAGATTACA
CGAGTCATGGTTTTATTCCTATTCTGTACACTTTATCAAAAAAAAAAAAA
AAAAAAA
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