FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALSV (Glucose-6-phosphate isomerase OS=Salmonella schwarzengrund (strain CVM19633) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALPB (Glucose-6-phosphate isomerase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALNS (Glucose-6-phosphate isomerase OS=Salmonella newport (strain SL254) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALHS (Glucose-6-phosphate isomerase OS=Salmonella heidelberg (strain SL476) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALEP (Glucose-6-phosphate isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALDC (Glucose-6-phosphate isomerase OS=Salmonella dublin (strain CT_02021853) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCVP (Glucose-6-phosphate isomerase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 92/218 (42.20%), Postives = 136/218 (62.39%), Query Frame = 2
Query:   59 ICDTEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            I  T  W+ L  H  EI+   LR L +D   R     +    + +DYS+   T +T+D L  LA  A L  K + M++G  IN++E+R+VLH ALR PRDA++  DG++VV +V +VLD++ +F++ +RSG W GATG+ +  VV +GIGGS LGP+ V  AL+   +A     G   +F++NVDP D+   + GL+P TTL ++ SKTF+T ET+ N
Sbjct:    5 ITATPAWQALSRHHDEIRAKDLRGLFADDPTRGTGFALTVGDLYIDYSKHRVTRETLDLLLDLARTAGLPAKRDAMFSGAHINTSEDRAVLHTALRLPRDASLTVDGQDVVADVHEVLDRMGDFTDRLRSGEWRGATGERITTVVNIGIGGSDLGPVMVDQALRHYADA-----GISARFVSNVDPADLVAKLNGLDPATTLFIIASKTFSTLETLTN 217          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ERWCT (Glucose-6-phosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 98/216 (45.37%), Postives = 132/216 (61.11%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H   +K   + +L + D+DR       FD  +L+DYS+   T +TM KL+ LA    L   I+ M+ GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL K+K+FSE +  G W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+++  LNPETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQTHFDAMKDVKISELFAQDSDRFAHFSATFDDQMLVDYSKNRITAETMGKLHALARETDLPAAIHAMFAGEKINRTEDRAVLHVALRNRSNTPILVDGKDVMPEVNAVLAKMKDFSERVIGGEWKGYTGKTITDVVNIGIGGSDLGPFMVTEALKPYKNHL------NMHFVSNVDGTHIAETLKPLNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALG2 (Glucose-6-phosphate isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pgi PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.261e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKLQDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_EDWI9 (Glucose-6-phosphate isomerase OS=Edwardsiella ictaluri (strain 93-146) GN=pgi PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.261e-42
Identity = 96/216 (44.44%), Postives = 130/216 (60.19%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  ++K  H+RDL + D DR       FD  +L+DYS+     +T++KL  LA    L   I  M+ GEKIN TE+R+VLH+ALR   +  I  DGK+V+PEV  VL K+K+F   +  G W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+++  LNPETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQQHFGQMKSVHMRDLFAADADRFSKFSATFDDQMLVDYSKNRINAETLEKLQALARETDLQGAIAAMFAGEKINRTEDRAVLHIALRNRSNTPICVDGKDVMPEVNAVLAKMKQFCVRVIDGEWRGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHL------TMHFVSNVDGTHIAETLQRLNPETTLFLVASKTFTTQETMTN 218          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_SALSV5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella schwar... [more]
G6PI_SALPB5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella paraty... [more]
G6PI_SALNS5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella newpor... [more]
G6PI_SALHS5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella heidel... [more]
G6PI_SALEP5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella enteri... [more]
G6PI_SALDC5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella dublin... [more]
G6PI_MYCVP5.560e-4242.20Glucose-6-phosphate isomerase OS=Mycobacterium van... [more]
G6PI_ERWCT5.560e-4245.37Glucose-6-phosphate isomerase OS=Erwinia carotovor... [more]
G6PI_SALG27.261e-4244.91Glucose-6-phosphate isomerase OS=Salmonella gallin... [more]
G6PI_EDWI97.261e-4244.44Glucose-6-phosphate isomerase OS=Edwardsiella icta... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
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