FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:102..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_METCA (Glucose-6-phosphate isomerase OS=Methylococcus capsulatus GN=pgi PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.791e-47
Identity = 101/216 (46.76%), Postives = 137/216 (63.43%), Query Frame = 2
Query:   65 DTEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            D   W+ L  H + I   H+RD+ +D   R ++  V    +L DYS+   T +T+  L QLAE A L  KI+ M+ GE++N TENR+VLHVALR   +  I  DGK+V+PEV +VLD+++ FS+++R+G W GATGK + DVV +GIGGS LGP  V  ALQ   +        +  F++NVD  D+ + +  LNPETTL VV SKTFTT ETM N
Sbjct:    6 DLPAWRTLSEHFKTIAPRHMRDMFADDPGRFEAFSVRLGDLLFDYSKNRITRETVATLIQLAEEAGLREKIDAMFRGERLNVTENRAVLHVALRNRSNRPIRVDGKDVMPEVNRVLDRMRRFSQSVRTGEWRGATGKAITDVVNIGIGGSDLGPKMVVKALQPYADP-----RLRAHFVSNVDESDLVEILRPLNPETTLFVVASKTFTTQETMTN 216          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_FRASC (Glucose-6-phosphate isomerase OS=Frankia sp. (strain CcI3) GN=pgi PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.791e-47
Identity = 99/218 (45.41%), Postives = 142/218 (65.14%), Query Frame = 2
Query:   59 ICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            I  TE W  L  H++EI +  LRDL + D  R ++   E DG+ LDYS+   T +T++ L  LA  A L ++I  M+ GE+IN TENR VLHVALRAP    I  DG +VVP+V +VLD + +F++ +RSG W+GATG+ ++ VV +GIGGS LGP   + AL+   +     R  +++F++NVDP D+ ++   L+P +TL +V SKTFTT ET+ N
Sbjct:   15 ITATEEWAALTTHLREISEVSLRDLFAADPRRGETFAAEADGLYLDYSKNRLTARTVELLTALARRAGLADRIEAMFRGERINVTENRPVLHVALRAPAGTRIEVDGVDVVPDVHRVLDAMSQFADRVRSGDWLGATGERIRTVVNIGIGGSDLGPAMAYDALRDYAD-----RSIEVRFVSNVDPTDIWEATADLDPASTLFIVSSKTFTTLETISN 227          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCGI (Glucose-6-phosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=pgi PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.670e-46
Identity = 99/220 (45.00%), Postives = 143/220 (65.00%), Query Frame = 2
Query:   53 TPICDTEPWKDLKNHVQEIKKTHLRDLMSD-TDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T I  T  W+ L  H  EI +T+LR L +D   R     V   G+ +DYS+   T +T++ L  +A AA L  K + M++GE IN++E+R+VLH ALR PRDAA+  DG++VV +V +VLD++ +F++ +RSG W+GATG+ +  VV +GIGGS LGP+ V  AL+   +A     G   +F++NVDP D+   + GLNP TTL V+ SKTF+T ET+ N
Sbjct:    3 TDITATSEWQALARHRDEIGETNLRQLFADDAARGLRFAVTVGGLYIDYSKHRVTAETLNLLVDVARAAGLETKRDAMFSGEHINTSEDRAVLHTALRLPRDAALTVDGQDVVADVHEVLDRMGDFTDRLRSGDWLGATGERITTVVNIGIGGSDLGPVMVDQALRHYADA-----GISARFVSNVDPADLVAKLAGLNPATTLFVIASKTFSTLETLTN 217          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_GLOVI (Glucose-6-phosphate isomerase OS=Gloeobacter violaceus GN=pgi PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.849e-46
Identity = 100/220 (45.45%), Postives = 140/220 (63.64%), Query Frame = 2
Query:   53 TPICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            TP+     W+ L  H ++I++ HLR L + D  R +   +E +G  LDYS+   T +T+  L  LAE + L  +I  M++GEKIN+TE RSVLH ALRAPR A +  DG+NVVPEV  VLD++ EF++ +R G W G TG+ ++ VV +GIGGS+LGP   + AL+   +     R  +++F ANVD  + A+ I  L P+ TL +V SKTFTT ETM N
Sbjct:    8 TPLTQRAAWQALAAHYEQIREIHLRALFAEDPSRGERFALEAEGFYLDYSKNRLTDETLRLLSVLAEESDLRGRIEAMFSGEKINTTEQRSVLHTALRAPRGATVIEDGENVVPEVHAVLDRMAEFADRVRGGEWRGYTGRRIRTVVNIGIGGSYLGPDMAYDALKHYSD-----RDLKVRFAANVDGSNFAEVIHDLEPDETLFIVCSKTFTTLETMTN 222          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ANADE (Glucose-6-phosphate isomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pgi PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.347e-46
Identity = 100/219 (45.66%), Postives = 138/219 (63.01%), Query Frame = 2
Query:   56 PICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            P+  T  W+ L+ H+ E++  HLR+L + D  R   +  E  G+ LDYS+Q  T +T+  L  LAEA  L  +   M+ GEK+N+TE R+ LHVALRAPR   I  DGK+VVPEV  VLD++  F+E +RSG+W G TG+ ++ VV VGIGGS LGP   + AL+         R    +F++NVD  D+A+++  L+P  TL +V SKTFTT ETM N
Sbjct:    7 PLLRTPAWRALETHLAEVRPLHLRELFARDPGRGDRLAAEGAGLYLDYSKQRVTEETVRLLVALAEARGLPGRRAAMFRGEKVNATEGRAALHVALRAPRGERIEVDGKDVVPEVHAVLDRMAAFAEQVRSGAWTGFTGRRIRTVVNVGIGGSDLGPAMAYRALRA-----YTTREIAFRFVSNVDGTDLAEAVRDLDPAETLFLVASKTFTTLETMTN 220          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ROSCS (Glucose-6-phosphate isomerase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgi PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.083e-45
Identity = 99/212 (46.70%), Postives = 137/212 (64.62%), Query Frame = 2
Query:   77 WKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            W+ L+ H + I+  HLR L + D  R + M  E  G+  DYS+   T +T+  L  LAEA  L  +I+ M+ GE+IN TENR+VLHVALRAPR A I  DG NVVP+V  VLD++  F+E +RSG+W G TGK ++++V +GIGGS LGP+  + AL++        R   L+F++N+D  D A++   L+P  TL +V SKTFTT ETM N
Sbjct:   10 WRALETHYRAIRDVHLRRLFAEDPGRGERMTAEAAGLFFDYSKNRVTDETLRLLMALAEARGLRARIDAMFRGERINITENRAVLHVALRAPRGAVILVDGVNVVPDVHAVLDRMAAFAEQVRSGAWSGFTGKPIRNIVNIGIGGSDLGPVMAYEALRS-----YSRRNLTLRFVSNIDGNDFAEATRDLDPAETLFIVASKTFTTLETMTN 216          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ROSS1 (Glucose-6-phosphate isomerase OS=Roseiflexus sp. (strain RS-1) GN=pgi PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.412e-45
Identity = 98/212 (46.23%), Postives = 135/212 (63.68%), Query Frame = 2
Query:   77 WKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            W+ L+ H   I   HLR L + D  R + +  E  G+  DY++   T +T+  L  LAEA  L  +I+ M+ GE+IN+TENR+VLHVALRAPR A I  DG NVVPEV  VLD++  F+E +RSG W G TGK ++++V +GIGGS LGP+  + AL+   +     R   ++F++NVD  D A++   L+P  TL +V SKTFTT ETM N
Sbjct:   10 WRALETHYHAICNVHLRQLFAEDPGRGERLTAEAAGLFFDYAKNRITDETLRLLIALAEACDLRARIDAMFRGERINATENRAVLHVALRAPRGAVILVDGANVVPEVHAVLDRMAAFAEQVRSGRWTGFTGKPIRNIVNIGIGGSDLGPVMAYEALRYYSD-----RNLTVRFVSNVDGSDFAEATRDLDPAETLFIVASKTFTTLETMTN 216          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_RHOOB (Glucose-6-phosphate isomerase OS=Rhodococcus opacus (strain B4) GN=pgi PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.150e-45
Identity = 94/221 (42.53%), Postives = 146/221 (66.06%), Query Frame = 2
Query:   50 STPICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            S+ I  T  W+ L++H  +I+  HLR+L   D  R Q + V    + +DYS+      T+  L +LA +  L  + + M+ GE IN++E+R+VLH ALR P DA++  DG++VV +V +VLD++ +F++ +RSG W GATG+ +K VV +GIGGS LGP+ V+ AL+   +A     G  ++F++NVDP D+ +S++GL+P TTL +V SKTF+T ET+ N
Sbjct:    2 SSDITGTAAWQKLRDHHAQIQSVHLRELFEKDPARGQELTVSAGDLFIDYSKHRVDRDTIGLLLELARSVDLEARRDAMFAGEHINTSEDRAVLHTALRLPADASLVVDGQDVVADVHEVLDRMGDFTDRVRSGEWRGATGERIKTVVNIGIGGSDLGPVMVYRALRHYADA-----GISVRFISNVDPADLVRSLSGLDPATTLFIVASKTFSTLETLTN 217          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI1_RHOSR (Glucose-6-phosphate isomerase 1 OS=Rhodococcus sp. (strain RHA1) GN=pgi1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.150e-45
Identity = 95/221 (42.99%), Postives = 146/221 (66.06%), Query Frame = 2
Query:   50 STPICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            S+ I  T  W+ L++H  +I+  HLR+L   D  R Q + V    + +DYS+      T+  L +LA +A L  + + M+ GE IN++E+R+VLH ALR P DA++  DG++VV +V +VLD++ +F++ +RSG W GATG+ +K VV +GIGGS LGP+ V+ AL+   +A     G  ++F++NVDP D+ +S+ GL+P TTL +V SKTF+T ET+ N
Sbjct:    2 SSDITGTAAWQKLRDHHAQIQSVHLRELFEKDPARGQELTVTAGDLYIDYSKHRIDRDTLGLLLELARSADLEARRDAMFAGEHINTSEDRAVLHTALRLPADASLVVDGQDVVADVHEVLDRMGDFTDRVRSGEWRGATGERIKTVVNIGIGGSDLGPVMVYRALRHYADA-----GISVRFISNVDPADLVRSLQGLDPATTLFIVASKTFSTLETLTN 217          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_DEIGD (Glucose-6-phosphate isomerase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgi PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 4.114e-45
Identity = 96/212 (45.28%), Postives = 140/212 (66.04%), Query Frame = 2
Query:   77 WKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            W+ LK+H + ++  HLRDL + D  R + ++ E  G+ LDYS+   T +T+  L QLA  A +  + + M+ GE+IN TENR+VLH ALRAPR AA+  DG NVV EV +VLD++  F++ +R+G+W+GATGK ++++V +GIGGS LGP+  + AL+         R   L+F++NVD  D+ +    L+P  TL +V SKTFTT ETM N
Sbjct:   18 WQALKSHFETMRDRHLRDLFAADPRRGERLVAEGAGVYLDYSKNRITDETLRLLLQLAREAGVEARRDAMFAGERINLTENRAVLHSALRAPRGAAVTVDGTNVVQEVQEVLDRMSAFADRVRAGTWLGATGKPIRNIVNIGIGGSDLGPVMAYEALK-----FYADRRLTLRFVSNVDGTDLVEKTRDLDPAETLFIVSSKTFTTLETMAN 224          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_METCA9.791e-4746.76Glucose-6-phosphate isomerase OS=Methylococcus cap... [more]
G6PI_FRASC9.791e-4745.41Glucose-6-phosphate isomerase OS=Frankia sp. (stra... [more]
G6PI_MYCGI1.670e-4645.00Glucose-6-phosphate isomerase OS=Mycobacterium gil... [more]
G6PI_GLOVI2.849e-4645.45Glucose-6-phosphate isomerase OS=Gloeobacter viola... [more]
G6PI_ANADE6.347e-4645.66Glucose-6-phosphate isomerase OS=Anaeromyxobacter ... [more]
G6PI_ROSCS1.083e-4546.70Glucose-6-phosphate isomerase OS=Roseiflexus caste... [more]
G6PI_ROSS12.412e-4546.23Glucose-6-phosphate isomerase OS=Roseiflexus sp. (... [more]
G6PI_RHOOB3.150e-4542.53Glucose-6-phosphate isomerase OS=Rhodococcus opacu... [more]
G6PI1_RHOSR3.150e-4542.99Glucose-6-phosphate isomerase 1 OS=Rhodococcus sp.... [more]
G6PI_DEIGD4.114e-4545.28Glucose-6-phosphate isomerase OS=Deinococcus geoth... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
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