FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:102..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_NITMU (Glucose-6-phosphate isomerase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=pgi PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.017e-45
Identity = 97/220 (44.09%), Postives = 134/220 (60.91%), Query Frame = 2
Query:   53 TPICDTEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            TP+     WK L+ H Q IK  HLR L +D   R +    E  G+ LDYS+   T +T+  L QLAE   L  +I  M+ G+ IN TE R+VLH+ALRAPR+  I  DG +VVP V  VLD++ +FS+ IRSG W G TGK +++++ +GIGGS LGP+  + AL+              +F++NVD  D  ++  GL+PE TL ++ SKTFTT ET+ N
Sbjct:    3 TPLTQRPAWKALEAHYQTIKGMHLRQLFADDPKRGERFTAEAVGLYLDYSKNRITDETLHLLVQLAEECGLRERIEAMFRGDAINVTEQRAVLHIALRAPRNEKILVDGNDVVPGVHAVLDRMADFSDKIRSGDWQGHTGKRIRNIINIGIGGSDLGPVMAYEALRH-----YSLHNLSFRFISNVDGTDFVEATRGLDPEETLFIICSKTFTTTETLAN 217          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ANASK (Glucose-6-phosphate isomerase OS=Anaeromyxobacter sp. (strain K) GN=pgi PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.164e-45
Identity = 99/219 (45.21%), Postives = 139/219 (63.47%), Query Frame = 2
Query:   56 PICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            P+  T  W+ L+ H+ E++  HLR+L + D  R + ++ +  G+ LDYS+Q  T +T+  L  LAEA  L  +   M+ GEK+N TE R+VLHVALRAPR   I  DG +VVPEV  VLD++  F++ +RSG+W G TGK ++ VV VGIGGS LGP   + AL+         R    +F++NVD  D+A+++  L+P  TL +V SKTFTT ETM N
Sbjct:    7 PLLRTPAWRALEAHLAELQPLHLRELFARDPGRGERLVADGAGLHLDYSKQRVTEETVRLLAALAEARGLPERRAAMFRGEKVNVTEGRAVLHVALRAPRGERILVDGSDVVPEVHAVLDRMAAFADQVRSGAWTGFTGKRIRTVVNVGIGGSDLGPAMAYRALRA-----YATRDLAFRFVSNVDGTDLAEAVRDLDPAETLFLVASKTFTTLETMTN 220          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ANAD2 (Glucose-6-phosphate isomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgi PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.164e-45
Identity = 99/219 (45.21%), Postives = 139/219 (63.47%), Query Frame = 2
Query:   56 PICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            P+  T  W+ L+ H+ E++  HLR+L + D  R + ++ +  G+ LDYS+Q  T +T+  L  LAEA  L  +   M+ GEK+N TE R+VLHVALRAPR   I  DG +VVPEV  VLD++  F++ +RSG+W G TGK ++ VV VGIGGS LGP   + AL+         R    +F++NVD  D+A+++  L+P  TL +V SKTFTT ETM N
Sbjct:    7 PLLRTPAWRALEAHLAELQPLHLRELFARDPGRGERLVADGAGLHLDYSKQRVTEETVRLLVALAEARGLPERRAAMFRGEKVNVTEGRAVLHVALRAPRGERILVDGNDVVPEVHAVLDRMAAFADQVRSGAWTGFTGKRIRTVVNVGIGGSDLGPAMAYRALRA-----YAIRDLAFRFVSNVDGTDLAEAVRDLDPAETLFLVASKTFTTLETMTN 220          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI3_RHOSR (Glucose-6-phosphate isomerase 3 OS=Rhodococcus sp. (strain RHA1) GN=pgi3 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.164e-45
Identity = 94/218 (43.12%), Postives = 139/218 (63.76%), Query Frame = 2
Query:   59 ICDTEPWKDLKNHVQEIKKTHLRDLM-SDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            + +T PW  L  H +EI ++HLR L  SD DR     V    + +DYS+   T +T + L  LA +  +    + M +GE IN+TENR+VLH ALR PRDA+++ DG+++V +V + L+K+  F+E +R G W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G  L+F++N+DP D+  ++ GL+P  TL +V SKTF+T ET+ N
Sbjct:    9 LTETTPWLRLSEHSEEIDRSHLRALFASDPDRVDEFTVTAGDLHIDYSKHLITRRTRELLLDLARSVDVEGNRDAMLHGEHINTTENRAVLHTALRLPRDASLSVDGQDIVTDVHETLEKMGVFTERLRDGRWRGATGKKITTVVNIGIGGSDLGPVMVYRALRHYADA-----GISLRFVSNLDPADLTDNLRGLDPAATLFIVTSKTFSTLETLTN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCPA (Glucose-6-phosphate isomerase OS=Mycobacterium paratuberculosis GN=pgi PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.666e-44
Identity = 96/218 (44.04%), Postives = 136/218 (62.39%), Query Frame = 2
Query:   59 ICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            I  T  W  L+ H   I  THLR     D DR + + V    + +DYS+   T +T+  L  LA  A+L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG+NVV +V +VLD + EF++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:   10 ITATPAWDALRKHHDRIGDTHLRQFFEEDPDRGRELTVTVGDLYIDYSKHRVTRETLRLLVDLARTAKLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELIVDGRNVVADVHEVLDAMGEFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 222          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCA1 (Glucose-6-phosphate isomerase OS=Mycobacterium avium (strain 104) GN=pgi PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.666e-44
Identity = 96/218 (44.04%), Postives = 136/218 (62.39%), Query Frame = 2
Query:   59 ICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            I  T  W  L+ H   I  THLR     D DR + + V    + +DYS+   T +T+  L  LA  A+L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG+NVV +V +VLD + EF++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:   10 ITATPAWDALRKHHDRIGDTHLRQFFEEDPDRGRELTVTVGDLYIDYSKHRVTRETLRLLVDLARTAKLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELIVDGRNVVADVHEVLDAMGEFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 222          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCUA (Glucose-6-phosphate isomerase OS=Mycobacterium ulcerans (strain Agy99) GN=pgi PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.548e-44
Identity = 98/227 (43.17%), Postives = 140/227 (61.67%), Query Frame = 2
Query:   41 MASSTPICD---TEPWKDLKNHVQEIKKTHLRDLMSDT-DRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            M S  PI D   T  W+ L+ H  +I +THLR + +D  +R   + V    + +DYS+   T  T+  L  LA  A L    +QM+ G  IN++E+R+VLH ALR PRDA +  DG+NVV +V  VLD + +F++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:    1 MTSEQPIPDITATPAWEALRKHHDQIGETHLRQIFADDPNRGHDLTVTVGDLYIDYSKHRITRDTISLLVDLARTANLEAHRDQMFAGAHINTSEDRAVLHTALRLPRDAELIVDGRNVVEDVHAVLDAMGDFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 222          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ERWT9 (Glucose-6-phosphate isomerase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=pgi PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.548e-44
Identity = 99/216 (45.83%), Postives = 139/216 (64.35%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H +++K+ H+ DL + D +R  +    FD  +L+DYS+   T +T++KL  LA+   L + I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL K+K FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +      ++ F++NVD   +A+++  L+PETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQQHFEQMKEVHIADLFANDANRFAAFSATFDDRMLVDYSKNRITSETLEKLQALAKETDLQSAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIVVDGKDVMPEVNAVLAKMKAFSERIISGEWKGFTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------KMHFVSNVDGTHIAETLKMLSPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_DEIDV (Glucose-6-phosphate isomerase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=pgi PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 95/221 (42.99%), Postives = 139/221 (62.90%), Query Frame = 2
Query:   50 STPICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            S  + +T  W+ L+ H + +   HLRDL + D  R + +  E  G+ LDYS+   T +T+D L  LA A  L  + + M+ GEKIN TE R+VLH ALRAPR + +  DG+NVVP+V +VL+++  F++ +RSGSW+G TGK ++ +V +GIGGS LGP+  + AL+   +     R   ++F++NVD  D+ +    L  E TL +V SKTFTT ETM N
Sbjct:    2 SAALTETPAWQALQAHFETLHSVHLRDLFAADPGRGERLTAEGAGLYLDYSKHRVTDETLDLLVALAHARGLPERRDAMFGGEKINVTEGRAVLHTALRAPRGSDVLVDGRNVVPDVHEVLERMAAFAQQVRSGSWLGHTGKPIRAIVNIGIGGSDLGPVMAYEALRHYAQ-----RELTVRFVSNVDGTDLVEKTRDLTAEETLFIVSSKTFTTQETMAN 217          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ECOSM (Glucose-6-phosphate isomerase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=pgi PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.013e-43
Identity = 102/216 (47.22%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + DL + D DR     V FD  +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSVTFDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_NITMU7.017e-4544.09Glucose-6-phosphate isomerase OS=Nitrosospira mult... [more]
G6PI_ANASK9.164e-4545.21Glucose-6-phosphate isomerase OS=Anaeromyxobacter ... [more]
G6PI_ANAD29.164e-4545.21Glucose-6-phosphate isomerase OS=Anaeromyxobacter ... [more]
G6PI3_RHOSR9.164e-4543.12Glucose-6-phosphate isomerase 3 OS=Rhodococcus sp.... [more]
G6PI_MYCPA2.666e-4444.04Glucose-6-phosphate isomerase OS=Mycobacterium par... [more]
G6PI_MYCA12.666e-4444.04Glucose-6-phosphate isomerase OS=Mycobacterium avi... [more]
G6PI_MYCUA4.548e-4443.17Glucose-6-phosphate isomerase OS=Mycobacterium ulc... [more]
G6PI_ERWT94.548e-4445.83Glucose-6-phosphate isomerase OS=Erwinia tasmanien... [more]
G6PI_DEIDV7.758e-4442.99Glucose-6-phosphate isomerase OS=Deinococcus deser... [more]
G6PI_ECOSM1.013e-4347.22Glucose-6-phosphate isomerase OS=Escherichia coli ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
back to top