FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:102..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_DESHD (Glucose-6-phosphate isomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=pgi PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 54/175 (30.86%), Postives = 86/175 (49.14%), Query Frame = 2
Query:  182 ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDP--IDVAKSITGLNPETTLVVVVSKTFTTAET 700
            +LLD SR N + + + +L +    A   +++  +  G   N  E R V H  LR P  A      + +  ++ + L +I +F+E I SG   G  G   ++++ VG+GGS LGP FV  AL +  + ++        F+ N DP  ID   S  G     TL +++SK+  T ET
Sbjct:   22 LLLDISRMNFSAEFLTELAEPMRDAY--HQLQLLEKGALANPDEGRMVGHYWLRNPDLAPT----EEIAQDIKETLKEILDFAEQIHSGRLQGEKGNPFRNILLVGVGGSILGPRFVADALASSRDKMKAF------FIDNGDPDGIDRVLSRIGEELPATLCLIISKSGGTIET 184          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_PROMA (Glucose-6-phosphate isomerase OS=Prochlorococcus marinus GN=pgi PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11
Identity = 58/178 (32.58%), Postives = 82/178 (46.07%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPE--TTLVVVVSKTFTTAETML 706
            G  LD SR   + + +  L    + A  + K   +  G   N  E+R V H  LR    A       ++  E+    + IK F E I +G    A GK   DV+ +GIGGS LGPL +  +LQ +       +G    FL NVDP  + K++     +  TTL VVVSK+  T E  +
Sbjct:   29 GFWLDISRMKFSSEDIGSLQDNFKEACKSMKA--LEKGSIANIDESRQVGHYWLRNASLAPSKQTSNSIRNEI----NDIKTFGENILNGKITTAQGKPFTDVLWIGIGGSGLGPLLIVNSLQDN------NKGLNFSFLDNVDPNGINKTLNSFRDKLSTTLFVVVSKSGGTPEPQI 194          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_GEOMG (Glucose-6-phosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.976e-11
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  179 GILLDYSRQNAT---LKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPET--TLVVVVSKTFTTAET 700
            G++LD SR N     L +M+   Q A A     ++ ++  G   N  E R V H  LR+P      S    +  E+ + + +I+EF+  +  GS     G+  + ++ VGIGGS LGP FV  AL       +        F  N DP  + + +  + P+   TL VV+SK+  T ET
Sbjct:   21 GLMLDISRMNFADGFLASMESATQKAFA-----EMGELEGGAIANPDEGRMVGHYWLRSPD----LSPTDEIAAEIGETVQRIREFAAAVHGGSIAAPDGRPFRKLLVVGIGGSALGPQFVADALG------DVDNPLTPHFFDNTDPDGMDRVLAQIGPDLAGTLTVVISKSGGTKET 184          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_GEOSF (Glucose-6-phosphate isomerase OS=Geobacter sp. (strain FRC-32) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11
Identity = 60/178 (33.71%), Postives = 83/178 (46.63%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAA--QLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDP--IDVAKSITGLNPETTLVVVVSKTFTTAET 700
            G++LD SR N      D  +QL E    Q   ++ ++  G   N  E R V H  LR P  A      K +  E+   L  IKEF+E I SG+     G     ++ +GIGGS LGP FV  AL +  + I         F  N DP  +D+  +  G   + TL +V+SK+  T ET
Sbjct:   21 GMMLDLSRMNFP----DDFFQLMEPLMQQALEQMAELERGGIANGDEKRMVGHYWLRNPELAPT----KEISSEIGFTLRAIKEFTENIHSGAISPPNGSRYTRMLIIGIGGSALGPQFVADALGSAKDKITPF------FFDNTDPDGMDLVLARIGSYLKETLTIVISKSGGTKET 184          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_CYAP7 (Glucose-6-phosphate isomerase OS=Cyanothece sp. (strain PCC 7424) GN=pgi PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 2
Query:  272 INQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNP--ETTLVVVVSKTFTTAET 700
            + ++  G   N  E R V H  LRAP + A N +   V  E+ + L +I+EF   +  G+    T     D+++VGIGGS LGP FV  AL  D   +       + F+ N DP  + + +T L    ++TLV+V SK+  T ET
Sbjct:   50 MEELEKGAIANPDEGRMVGHYWLRAP-ELAPNDE---VRKEITEPLKQIEEFVAKVLKGTIKPPTADKFTDIISVGIGGSALGPQFVSEALAGDFPPM------GIHFIDNTDPAGIDRVVTRLKDRLKSTLVIVTSKSGGTPET 184          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ANASP (Glucose-6-phosphate isomerase OS=Anabaena sp. (strain PCC 7120) GN=pgi PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 57/182 (31.32%), Postives = 89/182 (48.90%), Query Frame = 2
Query:  179 GILLDYSRQN-------ATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPE--TTLVVVVSKTFTTAE 697
            G+ LD SR         + L   DK +  A+ A+L         G   N  ENR V H  LR P D A   +   +  E+ + L++I+ F+E I++G+          D++++GIGGS LGP FV  AL  +   +      ++ F+ N DP  + + +T L     +TLV+V+SK+  T E
Sbjct:   21 GLYLDVSRMRFDDAFVKSLLPKFDKAF--ADMAELEK-------GAIANPDENRMVGHYWLRNP-DLAPTPE---IAQEIVQTLEQIEAFAEKIQTGAIHPPKANRFTDIISIGIGGSALGPQFVAEALAPEFPPL------KIHFIDNTDPAGIDRILTHLRNHLASTLVLVISKSGGTPE 183          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_CHLPN (Glucose-6-phosphate isomerase OS=Chlamydia pneumoniae GN=pgi PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 50/183 (27.32%), Postives = 86/183 (46.99%), Query Frame = 2
Query:  179 GILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKIN-----STENRSVLHVALRA-PRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            G    ++ +      +  L  LAE   L+  +  M  G+ +N      +E R  LH A RA   D++   + +++         ++K+F   +RS             +V +GIGGS LGP  ++ AL+       C   + + F++N+DP + A+ +  ++    LVVVVSK+ TT ET +N
Sbjct:   45 GFTFSFATERLDDAILAALISLAEERGLHESMLAMQQGQVVNYIEGFPSEMRPALHTATRAWVTDSSFTGEAEDIAVRSRVEAQRLKDFLTKVRSQ---------FTTIVQIGIGGSELGPKALYRALRA-----YCPTDKHVHFISNIDPDNGAEVLDTIDCAKALVVVVSKSGTTIETAVN 213          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_DESHD1.744e-1130.86Glucose-6-phosphate isomerase OS=Desulfitobacteriu... [more]
G6PI_PROMA2.278e-1132.58Glucose-6-phosphate isomerase OS=Prochlorococcus m... [more]
G6PI_GEOMG2.976e-1130.73Glucose-6-phosphate isomerase OS=Geobacter metalli... [more]
G6PI_GEOSF5.076e-1133.71Glucose-6-phosphate isomerase OS=Geobacter sp. (st... [more]
G6PI_CYAP75.076e-1134.48Glucose-6-phosphate isomerase OS=Cyanothece sp. (s... [more]
G6PI_ANASP6.629e-1131.32Glucose-6-phosphate isomerase OS=Anabaena sp. (str... [more]
G6PI_CHLPN8.658e-1127.32Glucose-6-phosphate isomerase OS=Chlamydia pneumon... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
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