FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:102..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SHIFL (Glucose-6-phosphate isomerase OS=Shigella flexneri GN=pgi PE=3 SV=4)

HSP 1 Score: 174.096 bits (440), Expect = 6.568e-43
Identity = 100/216 (46.30%), Postives = 132/216 (61.11%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + DL + D DR       FD  +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +++ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHL------NMHFVSNVDGTHISEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SHIF8 (Glucose-6-phosphate isomerase OS=Shigella flexneri serotype 5b (strain 8401) GN=pgi PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 100/216 (46.30%), Postives = 132/216 (61.11%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEF-DGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + DL + D DR       F D +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +++ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFNDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHL------NMHFVSNVDGTHISEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCTU (Glucose-6-phosphate isomerase OS=Mycobacterium tuberculosis GN=pgi PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   47 SSTPICD---TEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +S PI D   T  W  L+ H  +I  THLR   +D   R + + V    + +DYS+   T +T+  L  LA  A L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG++VV +V  VLD +  F++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:    2 TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCTA (Glucose-6-phosphate isomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pgi PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   47 SSTPICD---TEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +S PI D   T  W  L+ H  +I  THLR   +D   R + + V    + +DYS+   T +T+  L  LA  A L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG++VV +V  VLD +  F++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:    2 TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCBT (Glucose-6-phosphate isomerase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pgi PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   47 SSTPICD---TEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +S PI D   T  W  L+ H  +I  THLR   +D   R + + V    + +DYS+   T +T+  L  LA  A L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG++VV +V  VLD +  F++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:    2 TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCBP (Glucose-6-phosphate isomerase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pgi PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   47 SSTPICD---TEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +S PI D   T  W  L+ H  +I  THLR   +D   R + + V    + +DYS+   T +T+  L  LA  A L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG++VV +V  VLD +  F++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:    2 TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_MYCBO (Glucose-6-phosphate isomerase OS=Mycobacterium bovis GN=pgi PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   47 SSTPICD---TEPWKDLKNHVQEIKKTHLRDLMSDTD-RCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +S PI D   T  W  L+ H  +I  THLR   +D   R + + V    + +DYS+   T +T+  L  LA  A L  + +QM+ G  IN++E+R+VLH ALR PRDA +  DG++VV +V  VLD +  F++ +RSG W GATGK +  VV +GIGGS LGP+ V+ AL+   +A     G   +F++NVDP D+  ++  L+P TTL +V SKTF+T ET+ N
Sbjct:    2 TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADA-----GISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_STRGG (Glucose-6-phosphate isomerase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=pgi PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.463e-42
Identity = 96/226 (42.48%), Postives = 137/226 (60.62%), Query Frame = 2
Query:   35 LQMASSTPICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            +  AS T +  T  W  L  H +E+    LR+L +   DR  +  +    + LDYS+   T +T+  L +LA A  +      M+ GEKIN+TE+R+VLH ALRAPRDA +  DG+NVVP V  VLDK+  F+E +RSG W G TGK +K++V +GIGGS LGP   +  L++  +     R   L+F++NVD  D+ +++  L+P  TL V+ SKTFTT ET+ N
Sbjct:    1 MNAASRTKLNQTPEWTALAKHREELGAPRLRELFARQPDRGTAYTLRVGDLHLDYSKHLVTDETLRLLRELAAATGVAELREAMFRGEKINTTEDRAVLHTALRAPRDAVVEVDGENVVPAVHAVLDKMAGFAEKVRSGQWTGHTGKPVKNIVNIGIGGSDLGPAMAYEVLRSFTD-----RDLTLRFVSNVDGADLHEAVRDLDPAETLFVIASKTFTTIETITN 221          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ENTS8 (Glucose-6-phosphate isomerase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=pgi PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.463e-42
Identity = 99/216 (45.83%), Postives = 134/216 (62.04%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEF-DGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+NH   +K+  L +L + D DR       F D +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K+FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPE+TL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQNHFDAMKEVTLAELFAKDADRFGKFSATFNDQMLVDYSKNRITEETLSKLLDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKKFSEAIISGEWKGYTGKPITDVVNIGIGGSDLGPFMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNPESTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SYNAS (Glucose-6-phosphate isomerase OS=Syntrophus aciditrophicus (strain SB) GN=pgi PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 97/224 (43.30%), Postives = 139/224 (62.05%), Query Frame = 2
Query:   41 MASSTPICDTEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            M +S  +   + WK L  H +  K  HLRDL + D  R + M  E  G+ LDYS+   T +T+  L +LAE   L  +I  ++ GEKIN TENR+ LHVALR+P+  +I  DG+NVVP+V  VLD++  F+  +RSGSW G +GK +++VV +GIGGS LGP+  + AL+   +     R    +F++N+D  D A+++  L+   TL +V SKTFTT ETM N
Sbjct:    1 MTASKKLTGCQAWKALAAHRRNWK-LHLRDLFAGDPGRGERMTAEAVGLFLDYSKNFVTDETLKLLLRLAEETGLRGRIEALFRGEKINLTENRAALHVALRSPKGTSIVVDGENVVPQVHDVLDRMAAFAVQVRSGSWKGHSGKGIRNVVNIGIGGSDLGPVMAYEALKYYSD-----RSLTFRFVSNIDGTDFAEAVQDLDAAETLFIVASKTFTTLETMTN 218          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_SHIFL6.568e-4346.30Glucose-6-phosphate isomerase OS=Shigella flexneri... [more]
G6PI_SHIF88.578e-4346.30Glucose-6-phosphate isomerase OS=Shigella flexneri... [more]
G6PI_MYCTU8.578e-4342.67Glucose-6-phosphate isomerase OS=Mycobacterium tub... [more]
G6PI_MYCTA8.578e-4342.67Glucose-6-phosphate isomerase OS=Mycobacterium tub... [more]
G6PI_MYCBT8.578e-4342.67Glucose-6-phosphate isomerase OS=Mycobacterium bov... [more]
G6PI_MYCBP8.578e-4342.67Glucose-6-phosphate isomerase OS=Mycobacterium bov... [more]
G6PI_MYCBO8.578e-4342.67Glucose-6-phosphate isomerase OS=Mycobacterium bov... [more]
G6PI_STRGG1.463e-4242.48Glucose-6-phosphate isomerase OS=Streptomyces gris... [more]
G6PI_ENTS81.463e-4245.83Glucose-6-phosphate isomerase OS=Enterobacter saka... [more]
G6PI_SYNAS1.911e-4243.30Glucose-6-phosphate isomerase OS=Syntrophus acidit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
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