FC926025

Overview
NameFC926025
Unique NameFC926025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10452 contig Ccv1_Contig10452:102..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_CITK8 (Glucose-6-phosphate isomerase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pgi PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 98/216 (45.37%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  ++K   + DL + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDDMKDVTIADLFAKDSDRFTRFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKAFSEAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI2_RHOSR (Glucose-6-phosphate isomerase 2 OS=Rhodococcus sp. (strain RHA1) GN=pgi2 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42
Identity = 93/218 (42.66%), Postives = 140/218 (64.22%), Query Frame = 2
Query:   59 ICDTEPWKDLKNHVQEIKKTHLRDLM-SDTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            + DT  WK L +H  E+  THLR+L  +D DR   ++V    + +DYS+   T +TM  L  LA AA +      M+ G  IN++E+R+VLH ALRA  +  +  DG++VV +V  VL ++ EF++ +RSG+W GATG+ ++ VV +GIGGS LGP   + AL+  ++      G +++F++N+DP D+  ++T L+P TTL VVVSKTF+T ETM N
Sbjct:    5 VTDTPLWKKLSDHHWEVVGTHLRELFDTDPDRGVDLIVTAADLYIDYSKHRVTRETMGLLVDLARAAGVERHREAMFTGAHINTSEDRAVLHTALRANPERELIVDGQDVVGDVHTVLRRMGEFTDRVRSGAWRGATGERIRTVVNIGIGGSDLGPAMAYRALRHYVD------GPEVRFVSNIDPADLLSNLTDLDPRTTLFVVVSKTFSTLETMTN 216          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_ECOLU (Glucose-6-phosphate isomerase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=pgi PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.496e-42
Identity = 100/216 (46.30%), Postives = 131/216 (60.65%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + DL + D DR       FD  +L+DYS+   T +T+ KL  LA+   L   I  M++GEKIN TENR+VLHVALR   +  I  DGK+V+PEV  VL+K+K FSE I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +N ETTL +V SKTFTT ETM N
Sbjct:    9 TAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNSETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_AERHH (Glucose-6-phosphate isomerase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=pgi PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.496e-42
Identity = 99/216 (45.83%), Postives = 135/216 (62.50%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDG-ILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T+ W+ L+ H    K+T L+DL + D  R     + F G IL+DYS+   T +T+  L  LA+   L + I+ M+NG+KIN TE RSVLHVALR   D  I  DGK+V+PEV  VL K+K F E I SG W G TGK ++ VV +GIGGS LGP+ +  AL+     +      Q+ F++NVD   +A+++  ++PETTL +V SKTFTT ETM N
Sbjct:    9 TQAWQALEAHFAANKETRLKDLFAQDPKRFDKFSLTFGGDILVDYSKNLITEETLKLLVDLAKETDLRSAIDAMFNGDKINMTEGRSVLHVALRNRSDRPIECDGKDVMPEVNAVLAKMKGFCEKIISGEWKGYTGKAIQHVVNIGIGGSDLGPVMITEALRPYKNHL------QMHFVSNVDGTHIAETLKKIDPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALPC (Glucose-6-phosphate isomerase OS=Salmonella paratyphi C (strain RKS4594) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.257e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALCH (Glucose-6-phosphate isomerase OS=Salmonella choleraesuis GN=pgi PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.257e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALA4 (Glucose-6-phosphate isomerase OS=Salmonella agona (strain SL483) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.257e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------NMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_METFK (Glucose-6-phosphate isomerase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=pgi PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.257e-42
Identity = 92/212 (43.40%), Postives = 138/212 (65.09%), Query Frame = 2
Query:   77 WKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILLDYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            W DL  H QE+    +RD+ + D  R +   +E +G+LLDYS+   T +T+  L++LA  +++    ++M+ GEKIN TENR+VLH ALR   +  +  DGK+V+P+V +VL ++++FS +IRSG W G +GK + DVV +GIGGS LGP+ V  AL+   +A     G    F++N+D   +A+++   +PETTL +V SKTFTT ETM N
Sbjct:   10 WHDLSAHYQEVLPLQMRDMFTKDGRRFEKFSLEAEGLLLDYSKHRITDETLPLLFKLARDSKVEEWRDRMFAGEKINFTENRAVLHTALRNRSNTPVYVDGKDVMPDVNRVLAQMRKFSTSIRSGEWKGYSGKRITDVVNIGIGGSDLGPVMVCGALKPYAQA-----GLNAHFVSNIDGTHLAQTLERCDPETTLFIVASKTFTTQETMTN 216          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALTY (Glucose-6-phosphate isomerase OS=Salmonella typhimurium GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
BLAST of FC926025 vs. ExPASy Swiss-Prot
Match: G6PI_SALTI (Glucose-6-phosphate isomerase OS=Salmonella typhi GN=pgi PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.560e-42
Identity = 97/216 (44.91%), Postives = 133/216 (61.57%), Query Frame = 2
Query:   68 TEPWKDLKNHVQEIKKTHLRDLMS-DTDRCQSMMVEFDGILL-DYSRQNATLKTMDKLYQLAEAAQLNNKINQMYNGEKINSTENRSVLHVALRAPRDAAINSDGKNVVPEVWKVLDKIKEFSETIRSGSWVGATGKVLKDVVAVGIGGSFLGPLFVHTALQTDLEAIECARGRQLQFLANVDPIDVAKSITGLNPETTLVVVVSKTFTTAETMLN 709
            T  W+ L+ H  E+K   + +L + D+DR       FD ++L D+S+   T +T+ KL  LA+   L   I  M++GEKIN TE+R+VLHVALR   +  I  DGK+V+PEV  VL+K+K FS+ I SG W G TGK + DVV +GIGGS LGP  V  AL+     +       + F++NVD   +A+ +  +NPETTL +V SKTFTT ETM N
Sbjct:    9 TSAWQALQKHYDEMKDVTIAELFANDSDRFAKFSATFDDLMLVDFSKNRITEETLAKLQDLAKETDLAGAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEVNAVLEKMKTFSQAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHL------TMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN 218          
The following BLAST results are available for this feature:
BLAST of FC926025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
G6PI_CITK81.911e-4245.37Glucose-6-phosphate isomerase OS=Citrobacter koser... [more]
G6PI2_RHOSR1.911e-4242.66Glucose-6-phosphate isomerase 2 OS=Rhodococcus sp.... [more]
G6PI_ECOLU2.496e-4246.30Glucose-6-phosphate isomerase OS=Escherichia coli ... [more]
G6PI_AERHH2.496e-4245.83Glucose-6-phosphate isomerase OS=Aeromonas hydroph... [more]
G6PI_SALPC4.257e-4244.91Glucose-6-phosphate isomerase OS=Salmonella paraty... [more]
G6PI_SALCH4.257e-4244.91Glucose-6-phosphate isomerase OS=Salmonella choler... [more]
G6PI_SALA44.257e-4244.91Glucose-6-phosphate isomerase OS=Salmonella agona ... [more]
G6PI_METFK4.257e-4243.40Glucose-6-phosphate isomerase OS=Methylobacillus f... [more]
G6PI_SALTY5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella typhim... [more]
G6PI_SALTI5.560e-4244.91Glucose-6-phosphate isomerase OS=Salmonella typhi ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YP21FM1 TF Citrus clementina cDNA clone KN0AAP11YP21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926025 ID=FC926025; Name=FC926025; organism=Citrus clementina; type=EST; length=709bp
ATCCCTCTCTTTCCTTGGTTTCTCCTTCAGGATTTTGCAAATGGCTTCCT
CAACTCCAATTTGTGACACCGAGCCATGGAAGGACTTGAAGAACCATGTG
CAGGAAATTAAAAAGACTCATTTACGTGATTTGATGAGTGACACTGATCG
ATGCCAATCAATGATGGTGGAGTTTGATGGGATTCTGTTGGACTACTCAC
GGCAAAATGCCACGCTTAAGACAATGGACAAACTCTATCAACTGGCAGAG
GCTGCTCAACTCAATAATAAGATTAACCAGATGTACAATGGGGAAAAAAT
TAACAGCACAGAGAATAGGTCTGTGCTTCATGTAGCTCTTCGTGCTCCAA
GGGATGCTGCCATAAATAGTGATGGGAAGAATGTGGTTCCAGAAGTCTGG
AAAGTTCTGGACAAGATAAAAGAGTTTTCTGAGACAATCCGCAGTGGTTC
CTGGGTTGGAGCCACTGGAAAAGTATTGAAAGATGTTGTTGCCGTTGGTA
TTGGCGGCAGTTTCTTGGGTCCTCTCTTTGTGCACACTGCTCTCCAAACT
GATCTAGAAGCCATTGAATGTGCAAGAGGACGCCAGTTGCAATTTCTAGC
AAATGTTGATCCCATTGATGTTGCTAAAAGTATCACGGGACTAAACCCTG
AAACTACCCTTGTTGTGGTGGTTTCAAAGACTTTTACAACGGCTGAAACT
ATGCTGAAT
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