FC926427

Overview
NameFC926427
Unique NameFC926427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length538
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11133 contig Ccv1_Contig11133:710..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC926427 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.254e-13
Identity = 34/105 (32.38%), Postives = 63/105 (60.00%), Query Frame = 1 
Query:  199 GNAAYKKKEFEKAIEHYSSALELDDRDISYLTNRAAVYLEMGKYEECIKDCDKAVERGRELRSDFKMIARALTRKGTALVKMAKCSKDYEPAIETFQNALTEHRN 513
            GN  YK+K+F++A++ Y  A++++  DI Y  N+AAV++EM  Y++ ++ C  A+E     +++F  +A+   R   + + M    K Y+ AIE ++ +L E  N
Sbjct:  250 GNEFYKQKKFDEALKEYEEAIQINPNDIMYHYNKAAVHIEMKNYDKAVETCLYAIENRYNFKAEFIQVAKLYNRLAISYINM----KKYDLAIEAYRKSLVEDNN 350
The following BLAST results are available for this feature:
BLAST of FC926427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
STI1L_PLAF75.254e-1332.38STI1-like protein OS=Plasmodium falciparum (isolat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP5YO08FM1 TF Citrus clementina cDNA clone KN0AAP5YO08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926427 ID=FC926427; Name=FC926427; organism=Citrus clementina; type=EST; length=538bp
TTATATGTGATCTTTTAGGGGCCCACTGGTGGTGATGACGTGGAATTGCA
GGACGAATATGCCCCATAAGGACCGGAGACGTCTAATGAGGAGACGAGGA
AGCCGGAGTCTGAGCCCGAGCCTGAGCCCATGGAGCTAACGGAGGAGGAG
AAGGAAGCTACGGAAAGAAAAGAAAAGGCATTAAAGGAGAAAGAGGCGGG
AAACGCTGCTTATAAGAAGAAGGAATTTGAGAAAGCAATTGAACATTACT
CCAGTGCACTGGAGCTCGATGATAGGGATATTTCTTACCTGACTAATCGT
GCGGCGGTTTATCTCGAAATGGGCAAGTATGAGGAATGCATCAAGGATTG
TGACAAGGCTGTCGAAAGGGGAAGAGAGCTTAGATCTGACTTTAAGATGA
TAGCAAGAGCTTTAACTAGGAAGGGAACTGCTCTGGTGAAAATGGCAAAA
TGTTCAAAGGACTATGAACCTGCTATTGAGACTTTCCAGAATGCTCTAAC
TGAGCATCGCAATCCCAGACACGTTGAAAAAACTTAAT
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