FC926430

Overview
NameFC926430
Unique NameFC926430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length153
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACHK (Thiamine biosynthesis protein thiC OS=Bacillus thuringiensis subsp. konkukian GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACCZ (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain ZK / E33L) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACCR (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACCQ (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain Q1) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACC7 (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain AH187) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACC4 (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain B4264) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACC3 (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain 03BB102) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACC2 (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain G9842) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACC1 (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain ATCC 10987) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
[Close]
BLAST of FC926430 vs. ExPASy Swiss-Prot
Match: THIC_BACC0 (Thiamine biosynthesis protein thiC OS=Bacillus cereus (strain AH820) GN=thiC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.987e-15
Identity = 38/50 (76.00%), Postives = 40/50 (80.00%), Query Frame = 2 
Query:    2 DLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEG 151
            DLAKGH  A   DDALSKARFEFRW DQF LSLDP  AM +HDETLP+EG
Sbjct:  479 DLAKGHKTAHQRDDALSKARFEFRWRDQFNLSLDPERAMEYHDETLPAEG 528
The following BLAST results are available for this feature:
BLAST of FC926430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
THIC_BACHK2.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus thu... [more]
THIC_BACCZ2.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACCR2.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACCQ2.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACC72.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACC42.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACC32.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACC22.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACC12.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]
THIC_BACC02.987e-1576.00Thiamine biosynthesis protein thiC OS=Bacillus cer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP13YK20FM1 TF Citrus clementina cDNA clone KN0AAP13YK20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926430 ID=FC926430; Name=FC926430; organism=Citrus clementina; type=EST; length=153bp
CGATTTAGCCAAAGGCCACCCACTTGCTCAGACATGGGATGATGCATTAA
GCAAGGCAAGATTTGAATTCCGATGGATGGACCAATTTGCATTGTCTTTG
GACCCCATGACTGCAATGTCCTTCCATGATGAAACCCTGCCATCAGAAGG
TGC
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