FC926436

Overview
NameFC926436
Unique NameFC926436
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10353 contig Ccv1_Contig10353:61..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.123e-19
Identity = 77/231 (33.33%), Postives = 109/231 (47.19%), Query Frame = 3
Query:   90 LKCAVELGIAD--AIHSHGRPITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTL-----WESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            L  A+EL + +  A    G  +T  E+AS L  Q P     L    RLL    + + T  D    + E  YGL P    L+K++    L+PL   L+DQD V     L  W+   D  L     +    G+  +DY   +    K FN+AM   S +    + +    F+GL+++VDVGGGTGA   +I   +P IK    DLPH + D P    +++V GDMF  IP  D
Sbjct:   18 LTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPL--RLIDQDRV----FLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGD 242          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.467e-19
Identity = 79/258 (30.62%), Postives = 123/258 (47.67%), Query Frame = 3
Query:   15 LTVRELFEGQAHLYKGIVKNLS--SMSLKCAVELGIADAIHSHGRP--ITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTL-----WESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            +T  ++ + +AHL+   + + S   M LK A+EL + + +   G    ++ SE+AS L  + P     L   +RLL    + + +  D    + E  YGL P    L K++    +SPL   L++QD V     +  W+   D  L     +    G+  ++Y   +    K FN+ M   S +    + +    F+GL SLVDVGGGTGA    I   +P IK    DLPH + D P    +++V GDMF  +P AD
Sbjct:    9 MTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLC--LMNQDKVL----MESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNAD 260          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.269e-19
Identity = 68/227 (29.96%), Postives = 113/227 (49.78%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRPITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFS-KTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYV--SSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M+LK A+EL + + +  +G P++ +E+AS L  + P     L   +RLL    + +   +  + +  E  YGL P    L K++   +S     L++QD V   S+ HL        +   +++G +  ++Y   +    K FN  M + S +    + +    F+GL SLVDVGGG GA  ++I   +P +K    DLPH + D P    +++V GDMF  +P  D
Sbjct:   34 MALKSALELDLLEIMAKNGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDG-VSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYG-MSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGD 258          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.282e-19
Identity = 73/228 (32.02%), Postives = 108/228 (47.37%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRPITLSELASAL-NIQPTKTRSLFHFMRLLVHMGLF--SKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYV--SSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + + I      ++ +E+AS L    P     +   +RLL    +   S   VD+    +  YGL P    L K++   +S     L++QD V   S+ HL        +   +++G   F +Y   +    K FN+ M   S +    V      FQGL SLVDVGGGTGA   +I   +P I+C   DLPH + D P+   +++V GDMF  +P  D
Sbjct:   15 MVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDD----QRVYGLAPVCKYLTKNQDG-VSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSF-EYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGD 236          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.282e-19
Identity = 68/228 (29.82%), Postives = 105/228 (46.05%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRS---LFHFMRLLVHMGLFS-KTKVDNHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + + I   G    +S +  A  +  T   +   L   +RLL    +   + K       E  YGL P    L K++    ++PL     D+  + S+ HLS       +   +++G   F +Y   +    K FNQ M + S +    + +    F GL+++VDVGGGTGA   +I   +P IK    DLPH + D P    +++V GDMF  +P  D
Sbjct:   32 MVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAF-EYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGD 258          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.510e-19
Identity = 73/228 (32.02%), Postives = 108/228 (47.37%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRPITLSELASAL-NIQPTKTRSLFHFMRLLVHMGLF--SKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYV--SSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + + I      ++ +E+AS L    P     +   +RLL    +   S   VD+    +  YGL P    L K++   +S     L++QD V   S+ HL        +   +++G   F +Y   +    K FN+ M   S +    V      FQGL SLVDVGGGTGA   +I   +P I+C   DLPH + D P+   +++V GDMF  +P  D
Sbjct:   15 MVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDD----QRVYGLAPVCKYLTKNQDG-VSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSF-EYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGD 236          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.510e-19
Identity = 75/255 (29.41%), Postives = 123/255 (48.24%), Query Frame = 3
Query:   15 LTVRELFEGQAHLYKGIVKNLS--SMSLKCAVELGIADAIHSHGRPITLS--ELASALNIQ-PTKTRSLFHFMRLLVHMGLFS---KTKVDNHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            +T  ++ + +A+L+   + + S   M LK A+EL + + +   G  + LS  ++AS L  + P     L   +RLL    + +   +T  D   + E  YGL P    L K++    ++PL     D+  + S+ HL        +   +++G   F +Y   +    K FN+ M   S +    + +    F+GL S+VDVGGGTGA   +I   +P IK    DLPH + D PQ   +++V GDMF  +P  D
Sbjct:    9 MTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADG--KVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAF-EYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGD 260          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.242e-18
Identity = 77/254 (30.31%), Postives = 122/254 (48.03%), Query Frame = 3
Query:   15 LTVRELFEGQAHLYKGIVKNLS--SMSLKCAVELGIADAIHSHGRPITLS--ELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKT-KVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQD--YVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            +T  ++ + +A+L+   + + S   M LK A+EL + + +   G    LS  +LAS L  + P     L   +RLL    + + + +     + E  YGL P    L K++   +S     L++QD   V S+ HL        +   +++G   F DY   +    K FN+ M   S +    + +    F+GL S+VDVGGGTGA   +I   +P IK    DLPH + D PQ   +++V GDMF  +P  D
Sbjct:    9 MTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDG-VSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAF-DYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGD 260          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.242e-18
Identity = 77/254 (30.31%), Postives = 121/254 (47.64%), Query Frame = 3
Query:   15 LTVRELFEGQAHLYKGIVKNLS--SMSLKCAVELGIADAIHSHGRPITLS--ELASAL-NIQPTKTRSLFHFMRLLV-HMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYV--SSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            +T   + + +A+L+   + + S   M LK A+EL + + I   G    +S  E+AS L    P     L   +RLL  ++ L    +     + +  YGL   +  L+K++   +S     L++QD V   S+ HL        +   +++G   F +Y   +    K FN+ M   S +    + +    F+GL+SLVDVGGGTGA    I   +P IK    DLPH + D P    +++V GDMF  IP AD
Sbjct:    9 ITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDG-VSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAF-EYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKAD 260          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.119e-18
Identity = 74/229 (32.31%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRP--ITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQ-EEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYV--SSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + + I   G    ++ SELA+ L  Q P     L   +RLL    + + T  D  +   E  Y L P    L K++   +S     L++QD V   S+ HL        +   +++G   F +Y  ++    K FNQ M + S +    + +    FQGL+++VDVGGGTGA   +I   +P IK    DLPH + D P    + +V GDMF  +P  D
Sbjct:   34 MVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDG-VSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAF-EYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGD 260          
The following BLAST results are available for this feature:
BLAST of FC926436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
COMT1_EUCGL1.123e-1933.33Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_POPKI1.467e-1930.62Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
OMT1_ARATH4.269e-1929.96Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
OMT1_CHRAE7.282e-1932.02Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_OCIBA7.282e-1929.82Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT2_CHRAE9.510e-1932.02Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
COMT1_PRUDU9.510e-1929.41Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH1.242e-1830.31Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_MEDSA1.242e-1830.31Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CATRO2.119e-1832.31Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP5YO14FM1 TF Citrus clementina cDNA clone KN0AAP5YO14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926436 ID=FC926436; Name=FC926436; organism=Citrus clementina; type=EST; length=752bp
TTGAAAATGACGGGTTAACTGTAAGAGAGTTGTTTGAAGGTCAAGCTCAT
CTGTATAAGGGCATCGTTAAGAATTTAAGTTCTATGTCACTCAAATGTGC
GGTTGAGCTAGGCATAGCGGACGCAATTCACAGCCACGGACGACCAATCA
CTCTGTCTGAGTTAGCCTCAGCTCTCAACATTCAGCCTACAAAAACTCGA
AGTCTATTTCATTTCATGCGTCTGTTAGTTCACATGGGCTTGTTTTCAAA
AACCAAAGTTGACAACCACAACGAGCAAGAAGAAGCATATGGCCTCACAC
CTACTTCGACCCTGCTCATCAAAGATAAGCCCTACTGTTTGTCACCACTT
GTCACTGGATTGCTTGACCAAGATTATGTCTCTTCATTCCAGCATTTAAG
TAGGTGGTTCAAAGGGAACGATCTCACATTATGGGAATCTTTCGGCGGGT
TGAAGTTTTGGGACTATCTGAACCAGAACACTGCATTAACCAAGCGGTTC
AACCAAGCAATGGAAAGCGATTCTGAAATGGCAACCTTGATTGTCAAAGA
CTGCAAGCCAATCTTTCAAGGGTTGCGCTCCCTGGTTGATGTAGGAGGTG
GAACGGGTGCATTCGCGAGAATCATATCTGAAGCATTCCCCGGCATCAAG
TGCACAGTACTTGACCTCCCACATGCGGTCACTGACATGCCTCAGACTGA
CAACTTGAAGTACGTAGTGGGTGATATGTTTCAGTTTATTCCTGCGGCAG
AC
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