FC926436

Overview
NameFC926436
Unique NameFC926436
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10353 contig Ccv1_Contig10353:61..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.614e-18
Identity = 74/235 (31.49%), Postives = 109/235 (46.38%), Query Frame = 3
Query:   63 IVKNLSSMSLKCAVELGIADAIHSHGRPITLS--ELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            I  ++  M LK A+EL + + +   G    LS  ++AS L  + P     L   +RLL    +   +  D    + E  YGL      L K++    +SPL     D+  + S+ HL        +   +++G   F +Y   +    K FN+ M   S+MA   + +    F+GL SLVDVGGGTGA    I   +P IK    DLPH + D P    ++ V GDMF  +P AD
Sbjct:   26 ISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAF-EYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDMFVSVPKAD 259          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.614e-18
Identity = 67/228 (29.39%), Postives = 103/228 (45.18%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRPITLSELASALNIQPTKTRS---LFHFMRLLVHMGLFS-KTKVDNHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + + I   G    +S    A  +  T   +   L   +RLL    +   + K       +  YGL P    L K++    ++PL     D+  + S+ HL        +   +++G   F +Y   +    K FNQ M + S +    + +    F GL+++VDVGGGTGA   +I   +P IK    DLPH V D P    +++V GDMF  +P  D
Sbjct:   32 MVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAF-EYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGD 258          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.051e-17
Identity = 73/235 (31.06%), Postives = 109/235 (46.38%), Query Frame = 3
Query:   63 IVKNLSSMSLKCAVELGIADAIHSHGRPITL--SELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            I  ++  M LK A+EL + + +   G    L  S++AS L  + P     L   +RLL    +   +  D    + E  YGL      L +++    +SPL     D+  + S+ HL        +   +++G   F +Y   +    K FN+ M   S+MA   + +    F+GL SLVDVGGGTGA    I   +P IK    DLPH + D P    ++ V GDMF  +P AD
Sbjct:   26 ISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAF-EYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDMFVSVPKAD 259          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.051e-17
Identity = 71/229 (31.00%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRP--ITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVDNHNEQ--EEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + + I   G    ++ SELA+ L    P     L   +RLL    +    K++N  +   E  YGL P    L K+     ++PL+    D+  + S+ HL        +   +++G   F +Y   +    K FNQ M + S +    + +    F+GL+++VDVGGGTGA   +I   +P IK    +LPH V D P    +++V GDMF  +P  D
Sbjct:   21 MVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLD-CKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAF-EYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGD 247          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.373e-17
Identity = 66/229 (28.82%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRP---ITLSELASAL-NIQPTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M+LK A+EL + + +     P   I+ +E+A+ L    P     L   +RLL    + + T  +    + E  YGL P    L K++    L+P +    D+  +  + +L        +   +++G  +F DY   +    K FN+ M S+S +    + +    F+GL ++VDVGGGTGA A +I   +P I     DLPH + D P    ++++ GDMF  +P  D
Sbjct:   36 MALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEF-DYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGD 263          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.794e-17
Identity = 73/257 (28.40%), Postives = 120/257 (46.69%), Query Frame = 3
Query:   15 LTVRELFEGQAHLYKGIVKNLS--SMSLKCAVELGIADAIHSHGRPITLS--ELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTL-----WESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            +T  ++ + +A+L+   + + S   M LK A+EL + + +   G    LS  E+A+ L  Q P     L    RLL    + + T  +    + E  YGL P    L+K++   +S     L++QD +     +  W+   D  L     +    G+  ++Y   +    K FN+ M   S +    + +    F+GL ++VDVGGGTGA   +I   +P +K    DLPH + D P    +K+V GDMF  +P  D
Sbjct:   10 MTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDG-VSIAALNLMNQDKIL----MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINFDLPHVIEDAPPLPGVKHVGGDMFVSVPKGD 261          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17
Identity = 63/234 (26.92%), Postives = 110/234 (47.01%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSH---GRPITLSELASALNIQPTKTRS---LFHFMRLLVHMGLFSKTKVDNHNEQEEAYGLTPTSTLLIKDKPYCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTL-----WESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M+LK A+ELG+ + + +    G+ +   E+ + L + PT   +   +   +RLL    +      D   + E  Y   P    L  ++       +T L++QD V     +  W+   D  L     +    G+  ++Y   +    + FN+ M++ S + T  + +    F+G+ +LVDVGGG GA    I+   P IK    DLPH +++ P    +++V GDMF+ +PA D
Sbjct:   31 MTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALT-LMNQDKVL----MESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGD 259          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-16
Identity = 71/228 (31.14%), Postives = 107/228 (46.93%), Query Frame = 3
Query:   84 MSLKCAVELGIAD--AIHSHGRPITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKT-KVDNHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK A+EL + +  A    G  I+ SELA+ L  + P     L   +RLL    + + T +       E  Y L P   LL K+     ++PL+    D+  + S+ HL+       +   +++G   F +Y   +    K FN+ M   S M    + +    F+GL S+VDVGGGTGA   +I   +P IK    DL H + D P    +++V  DMF  +P AD
Sbjct:   30 MVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAF-EYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKAD 256          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16
Identity = 71/256 (27.73%), Postives = 119/256 (46.48%), Query Frame = 3
Query:   15 LTVRELFEGQAHLYKGIVKNLS--SMSLKCAVELGIADAI-----HSHGRPITLSELASAL-NIQPTKTRSLFHFMRLLVHMGLFSKTKVD-NHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            LT   + + +A+L+   + + S   M LK A+EL + + +     H  G  I+ +E+A+ L    P     L   +RLL    + + +  +    + E  YGL P    L K++    L+PL     D+  + S+ +L        +   +++G   F +Y   +    K FN+ M   S +    + +    F+ L ++VDVGGGTGA   +I   +P IK    DLPH + D P    +++V GDMF  +P  D
Sbjct:   11 LTPTHVSDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAF-EYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGD 265          
BLAST of FC926436 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 68/228 (29.82%), Postives = 105/228 (46.05%), Query Frame = 3
Query:   84 MSLKCAVELGIADAIHSHGRP--ITLSELASALNIQ-PTKTRSLFHFMRLLVHMGLFSKT-KVDNHNEQEEAYGLTPTSTLLIKDKP-YCLSPLVTGLLDQDYVSSFQHLSRWFKGNDLTLWESFGGLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAAD 752
            M LK  VEL + + +   G    I+ SELA+ L  + P     L    RLL    + + T +       E  Y L P    L K+     ++P++    D+  + S+ HL+       +   +++G   F +Y   +    K FN  M   + ++   + +    F+GL S+VDVGGGTGA   +I   +P IK    DLPH + D P    ++ V GDMF  +P AD
Sbjct:   30 MVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTF-EYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKAD 256          
The following BLAST results are available for this feature:
BLAST of FC926436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
COMT3_POPKI3.614e-1831.49Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_OCIBA3.614e-1829.39Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT2_POPTM1.051e-1731.06Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_COFCA1.051e-1731.00Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
IEMT_CLABR1.373e-1728.82(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGU1.794e-1728.40Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_SACOF8.902e-1726.92Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_CAPAN1.163e-1631.14Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CLABR1.983e-1627.73Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CAPCH4.418e-1629.82Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP5YO14FM1 TF Citrus clementina cDNA clone KN0AAP5YO14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926436 ID=FC926436; Name=FC926436; organism=Citrus clementina; type=EST; length=752bp
TTGAAAATGACGGGTTAACTGTAAGAGAGTTGTTTGAAGGTCAAGCTCAT
CTGTATAAGGGCATCGTTAAGAATTTAAGTTCTATGTCACTCAAATGTGC
GGTTGAGCTAGGCATAGCGGACGCAATTCACAGCCACGGACGACCAATCA
CTCTGTCTGAGTTAGCCTCAGCTCTCAACATTCAGCCTACAAAAACTCGA
AGTCTATTTCATTTCATGCGTCTGTTAGTTCACATGGGCTTGTTTTCAAA
AACCAAAGTTGACAACCACAACGAGCAAGAAGAAGCATATGGCCTCACAC
CTACTTCGACCCTGCTCATCAAAGATAAGCCCTACTGTTTGTCACCACTT
GTCACTGGATTGCTTGACCAAGATTATGTCTCTTCATTCCAGCATTTAAG
TAGGTGGTTCAAAGGGAACGATCTCACATTATGGGAATCTTTCGGCGGGT
TGAAGTTTTGGGACTATCTGAACCAGAACACTGCATTAACCAAGCGGTTC
AACCAAGCAATGGAAAGCGATTCTGAAATGGCAACCTTGATTGTCAAAGA
CTGCAAGCCAATCTTTCAAGGGTTGCGCTCCCTGGTTGATGTAGGAGGTG
GAACGGGTGCATTCGCGAGAATCATATCTGAAGCATTCCCCGGCATCAAG
TGCACAGTACTTGACCTCCCACATGCGGTCACTGACATGCCTCAGACTGA
CAACTTGAAGTACGTAGTGGGTGATATGTTTCAGTTTATTCCTGCGGCAG
AC
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