FC927058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B2C_HUMAN (Putative histone H2B type 2-C OS=Homo sapiens GN=HIST2H2BC PE=5 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 5.750e-17 Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 2 Query: 17 ETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSR 190 E+ Y++KVLK+VHPD GI KAMGIMNSF+NDIFE++A EASRLA YNK+ TITSR Sbjct: 36 ESYSIYVYKVLKRVHPDTGIWCKAMGIMNSFLNDIFERIAGEASRLAHYNKRSTITSR 93
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2BFM_HUMAN (Histone H2B type F-M OS=Homo sapiens GN=H2BFM PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.673e-16 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 32 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 274 Y +VLKQVH + +S +A+ +M+S I+DI +++A EA +LA Y K+ TITSR+IQ AVRL+LPG++ K A ++GT A + Sbjct: 166 YFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALR 246
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2BV_BOVIN (Histone H2B subacrosomal variant OS=Bos taurus GN=SUBH2BV PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 5.382e-15 Identity = 40/85 (47.06%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 32 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 YI +VLK+V P GISS+ + I+N+ IND+FE+++ EA L Y K+ T+T +I+ AV L+LP +LAK+AV+ G +AV ++ S Sbjct: 38 YINRVLKEVVPQKGISSRTIDIINTMINDMFERISTEACNLMYYRKRCTLTPEDIEKAVYLLLPEKLAKYAVAFGKEAVQRYVRS 122
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2BV_MOUSE (Histone H2B subacrosomal variant OS=Mus musculus GN=Subh2bv PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.772e-14 Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 32 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 YI +VLK+V P+ GISS ++ IMN INDIFE++A EA + K+ T+T +IQ AV L+LP +LA AV+ G+KAV +F S Sbjct: 39 YINRVLKEVVPNRGISSYSVDIMNILINDIFERIATEACQQMFLRKRCTLTPGDIQQAVHLLLPKKLATLAVTFGSKAVHRFIHS 123
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2BV1_DICDI (Histone H2B.v1 OS=Dictyostelium discoideum GN=H2Bv1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 32 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 YI K++KQ++P I K++ I+ S I D + EA L + + K T+++R++QT+VRL GE+++HAVSEG K VT F S+ Sbjct: 19 YIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNSA 103 The following BLAST results are available for this feature:
BLAST of FC927058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >FC927058 ID=FC927058; Name=FC927058; organism=Citrus clementina; type=EST; length=431bpback to top |