FC927058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B4_ORYSI (Histone H2B.4 OS=Oryza sativa subsp. indica GN=H2B.4 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.662e-40 Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 AKK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B3_ORYSJ (Histone H2B.3 OS=Oryza sativa subsp. japonica GN=H2B.3 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.662e-40 Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 AKK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B3_ORYSI (Histone H2B.3 OS=Oryza sativa subsp. indica GN=H2B.3 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.662e-40 Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 AKK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B2_WHEAT (Histone H2B.2 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 1.662e-40 Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 AKK ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 56 AKKGVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B10_ORYSJ (Histone H2B.10 OS=Oryza sativa subsp. japonica GN=H2B.10 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.662e-40 Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 AKK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B10_ORYSI (Histone H2B.10 OS=Oryza sativa subsp. indica GN=H2B.10 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.662e-40 Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 AKK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 59 AKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B3_WHEAT (Histone H2B.3 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 3.701e-40 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 +KK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 44 SKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 138
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B7_ORYSJ (Histone H2B.7 OS=Oryza sativa subsp. japonica GN=H2B.7 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.834e-40 Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 2 Query: 5 KKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 KK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 60 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B7_ORYSI (Histone H2B.7 OS=Oryza sativa subsp. indica GN=H2B.7 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.834e-40 Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 2 Query: 5 KKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 KK+ ET K YIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 60 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of FC927058 vs. ExPASy Swiss-Prot
Match: H2B_TOBAC (Histone H2B OS=Nicotiana tabacum GN=HIS2B PE=2 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 1.407e-39 Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 2 Query: 2 AKKTFETDKTYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 286 A+ + ET K YIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+E+SRLA YNKKPTI+SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 52 AEMSVETYKIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 146 The following BLAST results are available for this feature:
BLAST of FC927058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >FC927058 ID=FC927058; Name=FC927058; organism=Citrus clementina; type=EST; length=431bpback to top |