FC927891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 2.562e-92 Identity = 169/196 (86.22%), Postives = 174/196 (88.78%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 589 SHPGFGCWLSGVDINTQQSFEALNQRAVA+VVDPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYR WTDGLTL RFD HSKTNEQTVQEML+LA KYNKAVQEEDEL PEK+AI NVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV+F Sbjct: 113 SHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF 308
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 280.026 bits (715), Expect = 6.340e-75 Identity = 139/197 (70.56%), Postives = 156/197 (79.19%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIFQ 592 SHPGFGCWLSGVDINTQQSFEAL++RAVA+VVDPIQSVKGKVVIDAFRLIN M+LG EPRQTTSNLGHLNKPSIQALIHGLNRHYYSI INYR W +GLTL + H K NE V+EML LA YNKAV+EED++ PE++AI NVG+QD K+HLEEHV LM+SNIVQ L MLDTV+F+ Sbjct: 114 SHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVFK 310
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 6.340e-75 Identity = 139/197 (70.56%), Postives = 156/197 (79.19%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIFQ 592 SHPGFGCWLSGVDINTQQSFEAL++RAVA+VVDPIQSVKGKVVIDAFRLIN M+LG EPRQTTSNLGHLNKPSIQALIHGLNRHYYSI INYR W +GLTL + H K NE V+EML LA YNKAV+EED++ PE++AI NVG+QD K+HLEEHV LM+SNIVQ L MLDTV+F+ Sbjct: 114 SHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVFK 310
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.040e-73 Identity = 132/197 (67.01%), Postives = 158/197 (80.20%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIFQ 592 SHPGFGCWLSGVDINTQQSFEAL++RAVA+VVDPIQSVKGKVVIDAFRLINP ++LGQEPRQTTSNLGHL KPS+QALIHGLNRHYYSI+INYR W DGLTL ++ H NE TV EML+LA YNK++++E+++ PE++AI NVG+QD K+HLEE V +M +NIVQ LG MLDT++F+ Sbjct: 112 SHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIVFK 308
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.161e-60 Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 589 SHPGFGCWLS VDINTQQSFE L RAVA+VVDPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSNLGH+NKPSIQALIHGL RHYYS+ INY+ W GL L F+ ++ N ++ +M +L+ +Y + VQ E L PE++ I VG+QD KKHL+ V + +NI L MLD+V F Sbjct: 113 SHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHGLGRHYYSLRINYKKTELEEIMLLNLHKQPWAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSMLACMLDSVAF 308
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.161e-60 Identity = 114/197 (57.87%), Postives = 142/197 (72.08%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIFQ 592 SHPGFGCWLSGVDINTQQSFEAL+ RAVA+VVDPIQSVKGKVVIDAFR INPQ+M L QEPRQTTSNLGHL KPSIQALIHGLNRHYYSI I YR W D +++ + + N++ ++ ML LA Y KA+++E + +++AI NVG+ D K+H+ + VS +++ NIVQ+L M+ T Q Sbjct: 116 SHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDLEQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMMATTSLQ 312
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.042e-58 Identity = 110/196 (56.12%), Postives = 137/196 (69.90%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 589 SHPGFGCWLS VD+NTQQSFE L RAVA+VVDP+QSV+GKVVIDAFR I EPRQ TSNLGHL PSIQALIHGLNR+YYSIAINYR WT+GL + +FD H ++NE+ + +L L +Y K++Q+ED++ PEK ++ VG+ D K+HL V LM++N+V+ L MLDTV F Sbjct: 114 SHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPT---AEPRQITSNLGHLQDPSIQALIHGLNRNYYSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEVSAVGKLDPKRHLISDVHTLMANNVVRVLTVMLDTVTF 306
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.985e-52 Identity = 100/194 (51.55%), Postives = 132/194 (68.04%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV 583 SHPGFGCWLS VD++TQ+SFE LN RAVA+VVDPIQSVKGKVVIDAFRLI+P T++ QEPRQTTSN+G LNKP+IQ+LIHGLNRHYYS+ I+Y W GL +H + + N + ++ + +A +Y K ++EE EL +++ VG+QD KKHL E ++ NIV L +++V Sbjct: 115 SHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSLIHGLNRHYYSLNIDYHKTSAELNMLMNLHKEQWQSGLKMHDYKEKERINLEATKKSVRIAEQYTKRIEEEKELTEDELKTRYVGKQDPKKHLSETAERVLEENIVSVLTAGVNSV 308
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.858e-50 Identity = 100/194 (51.55%), Postives = 129/194 (66.49%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV 583 SHPGFGCWLS VD+NTQ+SFE LN RAVA+VVDPIQSVKGKVVIDAFRLI+ ++ EPRQTTSN G LNK +IQALIHGLNRHYYS+ I+Y W GL ++ ++ ++N + M+ +A +Y+K ++EE EL E++ VGRQD KKHL E + +NIV L +++V Sbjct: 110 SHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKMYDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKTRYVGRQDPKKHLSETADETLENNIVSVLTAGVNSV 303
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.976e-49 Identity = 97/194 (50.00%), Postives = 126/194 (64.95%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTV 583 SHPGFGCWLS VD+NTQ+SFE LN RAVA+VVDPIQSVKGKVVIDAFRLI+ ++ QEPRQTTSN G +NK +IQALIHGLNRHYYS+ I+Y W GL + + N + + M+ +A +Y+K ++EE EL E++ VG+QD KKHL + N + N V L ++++ Sbjct: 110 SHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNKANIQALIHGLNRHYYSLNIDYHKTPAETKMLLNLHKEQWQSGLKMQDYQEKETENLEATKRMVAVAQQYSKRIEEEKELSEEELKTRYVGKQDPKKHLAKTAENTLEENTVSVLTAGVNSI 303 The following BLAST results are available for this feature:
BLAST of FC927891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC927891 ID=FC927891; Name=FC927891; organism=Citrus clementina; type=EST; length=608bpback to top |