FC927891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: RPN11_ENCCU (26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi GN=RPN11 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.743e-40 Identity = 95/196 (48.47%), Postives = 117/196 (59.69%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVIF 589 SHPGFGCWLS VDI+TQQSFE L +RAVA+VVDPIQSVKGKVVIDAFRLI+ Q +LG EPRQ TSN+G+L P++ ++IHGLN+HYYS I R W D L L D SK +E L L Y KA +EE L + +A VGR D ++ L E + N + +L + IF Sbjct: 104 SHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPIQSVKGKVVIDAFRLIDNQLGVLGGEPRQVTSNIGYLKTPTLISIIHGLNKHYYSFNITCRKNDFEQKMLLNLHRKTWADNLKLG--DVRSKR-----EEALKLIESYGKAFEEEKNLAGKNPDMAKVGRIDYRRRLLEKCEESIMENTIYSLLYSIHRYIF 292
BLAST of FC927891 vs. ExPASy Swiss-Prot
Match: YPT5_CAEEL (Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 9.562e-39 Identity = 85/203 (41.87%), Postives = 119/203 (58.62%), Query Frame = 2 Query: 2 SHPGFGCWLSGVDINTQQSFEALNQRAVALVVDPIQSVKGKVVIDAFRLINPQTMML-----GQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELP------PEKMAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLD 577 SHPGFGCWLS VD+NTQQSFEAL+ RAVA+VVDPIQSVKGKV++DAFR +NP + + EPRQTTSNLGHL KPS+ +++HGL YYS+ + YR W D L + + K E+ + + L +NK + E E P + + G+ +AK+ L+ S+L++ ++ L M++ Sbjct: 112 SHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKPSLISVVHGLGTKYYSLNVAYRMGSNEQKMLMCLNKKSWYDQLNMSTYSELEKKQEEKFKSINKLIAVFNKDIDEVKEKPIADKKGKTQEEVKKFGKINAKQQLQMITSSLLNDSLCHQLTAMIN 314 The following BLAST results are available for this feature:
BLAST of FC927891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC927891 ID=FC927891; Name=FC927891; organism=Citrus clementina; type=EST; length=608bpback to top |