FC927901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.960e-27 Identity = 60/146 (41.10%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 11 FFRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAQSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 448 FF F G A++V SC+GA YGTA +G +A++G RPE+VMKS++PVVM+G++G+YGL+++V+I+ ++P Y LF G+ AIG+VGD GV++ +Q ++FV M YGLIVG+IL ++ Sbjct: 12 FFGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIAGDMSPD-NDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMVLILIFAEVLGLYGLIVGLILQTK 156
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26 Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 5 APFFRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINP--KAQSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRA 451 APF G AA++ GAAYGTAKSG+ +A +G RP+L+MK ++PVVM+G++ +Y L++AV+I+ + P Q Y LF+G+ IGIVGD GVR+ Q ++FVGM YGLIV +IL++++ Sbjct: 15 APFIGMAGIAAAMIFGSAGAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLIVALILNTKS 165
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATL_ENTHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba histolytica GN=VMA3 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.467e-26 Identity = 61/146 (41.78%), Postives = 85/146 (58.22%), Query Frame = 2 Query: 8 PFFRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAQSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSS 445 PFF +G A++V + G AYGTAKS + ++S+GVM+PE +++S+ PVV AG++G+YGLI+ +++ IN Y L + MAIGI GD GVR AQQPKLFVGM YG IV +I++S Sbjct: 19 PFFGSMGITASIVFTVFGGAYGTAKSSVGISSVGVMKPEFIVRSVAPVVFAGIIGLYGLIVCILLF--INVTKSEYSLNRAFLDLGAGLTCGLCGLASGMAIGISGDCGVRGAAQQPKLFVGMLICLIFSEALALYGFIVALIMAS 162
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATL_ENTDI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba dispar GN=VMA3 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.706e-25 Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 5 APFFRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAQSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSS 445 +PFF +G A++V + G AYGTAKS + ++S+GVM+PE +M+S+ PVV AGV+G+YGLI+ +++ IN Y L + M+IGI GD GVR AQQPKLFV M YG IV +I+++ Sbjct: 16 SPFFGSMGITASIVFTVFGGAYGTAKSSVGISSVGVMKPEFIMRSLFPVVFAGVIGLYGLIVCIVLF--INVNKSEYSLNRAFLDLGAGLTCGLCGLASGMSIGISGDCGVRGAAQQPKLFVSMLICLIFSEALALYGFIVALIMAA 160
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATO_HUMAN (V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0B PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 47/157 (29.94%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 2 TAPF-FRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS------TGINPKAQSYYLFD-GYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 448 T+PF + LG A+ LS +GAA+G +G + GV P + K++V ++ + IYG+I+A++IS + +PKA + + GY + +GIVG A+AQ P LFV + +G+IV I+ +SR Sbjct: 44 TSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATO_BOVIN (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0B PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 47/157 (29.94%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 2 TAPF-FRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS------TGINPKAQSYYLFD-GYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 448 T+PF + LG A+ LS +GAA+G +G + GV P + K++V ++ + IYG+I+A++IS + +PKA + + GY + +GIVG A+AQ P LFV + +G+IV I+ +SR Sbjct: 44 TSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200
BLAST of FC927901 vs. ExPASy Swiss-Prot
Match: VATO_MOUSE (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0b PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 2 TAPF-FRFLGAPAALVLSCMGAAYGTAKSGLRVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIIS------TGINPKAQSYYLFD-GYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 448 T+PF + LG A+ LS +GAA+G +G + GV P + K++V ++ + IYG+I+A++IS + PKA + + GY + +GIVG A+AQ P LFV + +G+IV I+ +SR Sbjct: 44 TSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200 The following BLAST results are available for this feature:
BLAST of FC927901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC927901 ID=FC927901; Name=FC927901; organism=Citrus clementina; type=EST; length=625bpback to top |