FC927918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_THEP3 (V-type ATP synthase beta chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=atpB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.165e-22 Identity = 48/95 (50.53%), Postives = 73/95 (76.84%), Query Frame = 2 Query: 140 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 EY+TV + GPL++++KV+G KY E+V I G G +RRGQVLEV+G+KA+VQ+FEG++G++ V+F G+ ++ V +DMLGR+F+G G+P D Sbjct: 4 EYKTVREIVGPLMLVEKVEGVKYNELVEIETGTGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFDGLGRPRD 98
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METBA (V-type ATP synthase beta chain OS=Methanosarcina barkeri GN=atpB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.521e-22 Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 140 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 EY+T+T +AGPLV ++K + Y EIV I L DGT RRG+VL+ + V+Q+FEGT+G+D K V FTGE LK P +D+LGRI +GSG+P+D Sbjct: 4 EYKTITQIAGPLVFVEKTEPVGYKEIVTINLPDGTTRRGEVLDSSSDIVVIQIFEGTTGLD-KECGVVFTGETLKLPASIDLLGRILSGSGEPLD 97
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METM6 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.987e-22 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 125 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K V DMLGRIFNG+GKP+D Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGVAYGEIVDITTPNGEKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLD 103
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METB6 (V-type ATP synthase beta chain OS=Methanoregula boonei (strain 6A8) GN=atpB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.987e-22 Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 140 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 EYRT+T +AGPLV ++K + Y E+VNI L DGT++RGQVL+ + VVQ+FE T+GI + + V+FTGE +K PV +MLGRI +G GKPID Sbjct: 3 EYRTITKIAGPLVFVEKTEPIGYQELVNIVLSDGTIKRGQVLDTSDDLVVVQIFETTTGI-GRDSGVRFTGETIKMPVGREMLGRILSGGGKPID 96
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_META3 (V-type ATP synthase beta chain OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=atpB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.987e-22 Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 Query: 122 TLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 +LE +EY +V+ +AGPL++++ +KG Y EIV+I G R GQVLE + AVVQVFEGT+ ++ T ++F GE K V DMLGRIFNG+GKP+D Sbjct: 3 SLEKNIEYTSVSSIAGPLIVVEGIKGVAYGEIVSITCPSGEKRTGQVLEAREDVAVVQVFEGTTALNTSETKIRFVGETAKLGVSTDMLGRIFNGAGKPLD 103
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METST (V-type ATP synthase beta chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.595e-22 Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 98 NNVDMEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 N+VD++ EY TV+ VAGPL+++ V+G Y EIV I G R GQVLEV + AVVQVFEGTS ++ + T V+FTGE K + DMLGRIFNG GKPID Sbjct: 2 NDVDIK------TREYTTVSEVAGPLMVVQGVEGAAYNEIVEIETPAGENRTGQVLEVKEDIAVVQVFEGTSDLNTESTKVRFTGETAKIGLSTDMLGRIFNGIGKPID 104
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METMP (V-type ATP synthase beta chain OS=Methanococcus maripaludis GN=atpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.595e-22 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 125 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K V DMLGRIFNG+GKP+D Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLD 103
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METM7 (V-type ATP synthase beta chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.595e-22 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 2 Query: 125 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 ++ +EY +V+ +AGPL+++D ++G Y EIV+I +G R GQVLE E AVVQVFEGTS ++ T V+FTG+ K V DMLGRIFNG+GKP+D Sbjct: 4 MQKTIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLD 103
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_METBF (V-type ATP synthase beta chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=atpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.595e-22 Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 140 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 EY+T+T +AGPLV ++K + Y EIV I + DGT RRG+VL+ + V+Q+FEGT+G+D K V FTGE LK P +D+LGRI +GSG+P+D Sbjct: 4 EYKTITQIAGPLVFVEKTEPVGYKEIVTINMPDGTTRRGEVLDSSSDIVVIQIFEGTTGLD-KECGVVFTGETLKLPASIDLLGRILSGSGEPLD 97
BLAST of FC927918 vs. ExPASy Swiss-Prot
Match: VATB_FUSNN (V-type ATP synthase beta chain OS=Fusobacterium nucleatum subsp. nucleatum GN=atpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.595e-22 Identity = 50/95 (52.63%), Postives = 73/95 (76.84%), Query Frame = 2 Query: 140 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVPLDMLGRIFNGSGKPID 424 EY++V V GPL+I++ V+G KY E+V I+ G RRG+VLE+DG++A++Q+FEG++GI+ K TTV+F G+ L+ V DM+GRIF+G G PID Sbjct: 4 EYKSVQEVVGPLMIVEGVEGIKYEELVEIQTQTGEKRRGRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPID 98 The following BLAST results are available for this feature:
BLAST of FC927918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC927918 ID=FC927918; Name=FC927918; organism=Citrus clementina; type=EST; length=428bpback to top |