FC928165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of FC928165 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2 Query: 110 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 337 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 131.339 bits (329), Expect = 3.402e-30 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 2 Query: 338 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNLQKESTLPLVL 550 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN+QKESTL LVL Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 HSP 3 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 2 Query: 2 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 109 QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of FC928165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928165 ID=FC928165; Name=FC928165; organism=Citrus clementina; type=EST; length=590bpback to top |