FC928202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.584e-43 Identity = 83/124 (66.94%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P + WM RMR+L+RLLR+YRES KID MYH LY Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.584e-43 Identity = 83/124 (66.94%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P + WM RMR+L+RLLR+YRES KID MYH LY Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.375e-43 Identity = 84/124 (67.74%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P + WM RMR+L+RLLR+YRES KID MYH LY Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.818e-43 Identity = 83/124 (66.94%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P + WM RMR+L+RLLR+YRES KID MYH LY Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.282e-42 Identity = 82/124 (66.13%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P + WM RMR+L+RLLR+YRE+ KID MYH LY Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.187e-42 Identity = 79/124 (63.71%), Postives = 104/124 (83.87%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M +L+LQKRL+++VLKCG+ +VWLDPNEV+EIS ANSRQ+IR+LV DG IIRKP +HSR RAR ++A+RKGRH+GYGKR+GT AR+P LW+ RMRVL+ LLR+YR++ K+D +YH+LY Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 8.312e-42 Identity = 80/124 (64.52%), Postives = 101/124 (81.45%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 MVSLKLQKRL+AS+LKCG+ +VW+DPNE+ +++MANSR N+R+L+ GFI+RKP +HSRSRAR AKR GRH G G R GTREARLP+ ILW+ R+RVL+RLL+KYRE+ KID Y +LY Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 159.073 bits (401), Expect = 6.586e-39 Identity = 76/124 (61.29%), Postives = 99/124 (79.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M +L+ QKRL+ASV+ G+ KVWLDPNE +EI+ ANSR IRKLVK+G I++K +HS+SR R +KR+GRHSGYGKRKGTREARLP+ ++W+ R+RVL+RLL KYR++ KID +YH LY Sbjct: 1 MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_PYRHO (50S ribosomal protein L19e OS=Pyrococcus horikoshii GN=rpl19e PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.288e-26 Identity = 58/124 (46.77%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M +LK+Q+R++A +LKCG +VW+DP +V+E++ A +R++IR+L+K+G I +KP + SR RAR + K+KGRH G G RKG + AR+ LW+ +R L+R LRK +E KID Y LY Sbjct: 1 MNTLKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_PYRAB (50S ribosomal protein L19e OS=Pyrococcus abyssi GN=rpl19e PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.748e-26 Identity = 56/124 (45.16%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M +LK+Q+R++A +LKCG ++W+DP V++++ A +R++IR+L+K+G I +KP K SR RAR + K+KGRH G G RKG + AR+ LW+ +R L++ LRK +E KID Y LY Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLY 124 The following BLAST results are available for this feature:
BLAST of FC928202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928202 ID=FC928202; Name=FC928202; organism=Citrus clementina; type=EST; length=403bpback to top |