FC928202
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_PYRFU (50S ribosomal protein L19e OS=Pyrococcus furiosus GN=rpl19e PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.069e-25 Identity = 52/124 (41.94%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M +LK+Q+R++A +LKCG ++W+DP +++++ A +R++I++L+K+G I +KP K SR RA+ + K+KGRH G G RKG + AR+ LW+ +R L++ LRK + KID Y LY Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_ARCFU (50S ribosomal protein L19e OS=Archaeoglobus fulgidus GN=rpl19e PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.206e-24 Identity = 54/124 (43.55%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 ++ L LQ+RL+ASVLKCG +VW DP + +I+ A ++Q+IR+L++ G I RKP SR+R + K KRKGR G+G RKG + AR+P +W++R+R L++ LR+ + +D Y LY Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILY 126
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.741e-23 Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 2 Query: 41 LKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARR 226 LKLQKRL+AS LKCG+ KVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KIHSRSR ++ Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRCKK 62
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_METJA (50S ribosomal protein L19e OS=Methanocaldococcus jannaschii GN=rpl19e PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.879e-23 Identity = 48/124 (38.71%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 ++ + +Q+R++A +LKCG +VW+DP +++ + MA S+ +IR L+K+G I +K K S +R +++K+ ++KGR G G R+G AR P WM +R L++ L++ R+S KID +Y LY Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLY 126
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_METVA (50S ribosomal protein L19e OS=Methanococcus vannielii GN=rpl19e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21 Identity = 47/123 (38.21%), Postives = 78/123 (63.41%), Query Frame = 2 Query: 35 VSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 + + Q+R++A+VL CG +VW+DP + ++ MA ++ +IR L+ DG I++K K S +R + +++ KRKG+ G G R+G + AR P WM +R L+ LL++ RE+ KI+ Y LY Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLY 123
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_METTH (50S ribosomal protein L19e OS=Methanobacterium thermoautotrophicum GN=rpl19e PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.942e-20 Identity = 47/123 (38.21%), Postives = 77/123 (62.60%), Query Frame = 2 Query: 35 VSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 ++L QKRL+A +LK G ++W+DP ++E+S A +R +++L+KDG I KP K S R++++ K+KGR G G KG + AR P WM +R L++ L++ R++ +I+ Y LY Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLY 123
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_HALMA (50S ribosomal protein L19e OS=Haloarcula marismortui GN=rpl19e PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.023e-15 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L QKRL+A VL G+ +VW +P +I+ A +R+++R+LV +G I K K +SR RAR + + G G G RKG AR + W R+R + LR+ R+ + Y DLY Sbjct: 1 MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19E_HALSA (50S ribosomal protein L19e OS=Halobacterium salinarium GN=rpl19e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.299e-14 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M L QKRL+A VL G +VW DP+ +EI+ A +R++IR+LV DG I + T+ +SR RAR + G G G RKG AR ++ +R ++ LR+ R+ + Y ++Y Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMY 124
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_AERPE (50S ribosomal protein L19e OS=Aeropyrum pernix GN=rpl19e PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.133e-13 Identity = 44/122 (36.07%), Postives = 66/122 (54.10%), Query Frame = 2 Query: 44 KLQKRLSASVLKCGRVKVWL--DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKRKGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 + Q+RL+A +L G ++W+ DP EI A ++ ++R L+K G I P K ++ ++ +RKGR G G+RKG ARL WM R+R ++R LR R+ ID Y LY Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLY 125
BLAST of FC928202 vs. ExPASy Swiss-Prot
Match: RL19_SULAC (50S ribosomal protein L19e OS=Sulfolobus acidocaldarius GN=rpl19e PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.963e-12 Identity = 40/125 (32.00%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 32 MVSLKLQKRLSASVLKCGRVKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKDAKR-KGRHSGYGKRKGTREARLPT*ILWMIRMRVLKRLLRKYRESNKID*PMYHDLY 403 M +LQ+RL+A + G + +P + E+ A +R++I+KL+K+ +I P + S R + K +R KG +G RKG AR +W+ ++R ++R +R R++N ID Y LY Sbjct: 1 MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLY 125 The following BLAST results are available for this feature:
BLAST of FC928202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928202 ID=FC928202; Name=FC928202; organism=Citrus clementina; type=EST; length=403bpback to top |